RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
APOBEC3B-204ENST00000407298 SCPEP1Q9HB40 452 aa9.08□□□□□ -0.96
APOBEC3B-204ENST00000407298 IGLV11-55A0A075B6I3 123 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 CGB1A6NKQ9 187 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 PTBP1P26599 531 aaKnown RBP eCLIP9.07□□□□□ -0.963e-11■■■■■ 45.4
APOBEC3B-204ENST00000407298 GPR183P32249 361 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 ADMP35318 185 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 HERV-K104P61576 105 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 POU2AF1Q16633 256 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 LINC00336Q6ZUF6 198 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 SSX9Q7RTT3 188 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 OR51H1Q8NH63 302 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 AP3S1Q92572 193 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 SRSF8Q9BRL6 282 aaKnown RBP9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 C11orf68Q9H3H3 251 aaKnown RBP9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 DAZ1Q9NQZ3 744 aaKnown RBP9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 FBXL17Q9UF56 701 aa9.07□□□□□ -0.96
APOBEC3B-204ENST00000407298 TRAV3A0A0B4J244 114 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 MFSD2BA6NFX1 497 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 MPTX1A8MV57 137 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 S1PR2O95136 353 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 RLN1P04808 185 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 HLA-GP17693 338 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 RCVRNP35243 200 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 CATR1Q13166 79 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 AADACL3Q5VUY0 350 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 CLVS1Q8IUQ0 354 aaPredicted RBP9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 ZNF502Q8TBZ5 544 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 VN1R17PQ8TDU5 208 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 ABHD1Q96SE0 405 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 BET1LQ9NYM9 111 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 EXTL2Q9UBQ6 330 aa9.06□□□□□ -0.96
APOBEC3B-204ENST00000407298 SMIM31A0A1B0GVY4 71 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 FAM25AB3EWG3 89 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 FAM25CB3EWG5 89 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 FAM25GB3EWG6 89 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 TGOLN2O43493 480 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 PGLYRP1O75594 196 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 HPRT1P00492 218 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 REG1AP05451 166 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 TAS2R31P59538 309 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 ODF3L2Q3SX64 289 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 RNASE12Q5GAN4 147 aaKnown RBP9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 MZT2AQ6P582 158 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 SPSB3Q6PJ21 355 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 OR52I2Q8NH67 350 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 DYNC2LI1Q8TCX1 351 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 TMEM190Q8WZ59 177 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 BSCL2Q96G97 398 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 ATP6V0BQ99437 205 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 HRASLSQ9HDD0 168 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 KLK11Q9UBX7 282 aa9.05□□□□□ -0.96
APOBEC3B-204ENST00000407298 IGHV3-35A0A0C4DH35 117 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 C11orf94C9JXX5 98 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 K7EMT4 169 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 M0QYG6 137 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 NDUFA4O00483 81 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 UPK2O00526 184 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 CTDSP2O14595 271 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 FCGR2BP31994 310 aaPredicted RBP9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 OR2B8PP59922 312 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 CENPSQ8N2Z9 138 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 OR6F1Q8NGZ6 308 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 OR5B3Q8NH48 314 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 CD300LFQ8TDQ1 290 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 RAB2BQ8WUD1 216 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 COMMD5Q9GZQ3 224 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 PLEKHA2Q9HB19 425 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 TMEM140Q9NV12 185 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 COMMD9Q9P000 198 aa9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 CCDC59Q9P031 241 aaKnown RBP9.04□□□□□ -0.96
APOBEC3B-204ENST00000407298 H3BMQ9 156 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 GPR31O00270 319 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 FGF2P09038 288 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 MED14OSP0DP75 135 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 RPA2P15927 270 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 NQO2P16083 231 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 F2RP25116 425 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 RPL5P46777 297 aaKnown RBP9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 TMBIM6P55061 237 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 PHLDA2Q53GA4 152 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 THOC7Q6I9Y2 204 aaKnown RBP9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 HSD17B13Q7Z5P4 300 aaPredicted RBP9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 LHFPL1Q86WI0 220 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 OR4D10Q8NGI6 311 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 FCAMRQ8WWV6 532 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 BORCS5Q969J3 196 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 DGCR14Q96DF8 476 aaKnown RBP9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 BCL7BQ9BQE9 202 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 C20orf24Q9BUV8 137 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 MTFP1Q9UDX5 166 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 KIAA1109Q2LD37 5005 aa9.03□□□□□ -0.96
APOBEC3B-204ENST00000407298 IGLC7A0M8Q6 106 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 OR2T8A6NH00 312 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 MARCH11A6NNE9 402 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 C15orf62A8K5M9 175 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 IGLL5B9A064 214 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 IGKV1-39P01597 117 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms