RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 HSD17B13Q7Z5P4 300 aaPredicted RBP16.14■□□□□ 0.17
CHKB-201ENST00000406938 INO80EQ8NBZ0 244 aaPredicted RBP16.14■□□□□ 0.17
CHKB-201ENST00000406938 LFNGQ8NES3 379 aa16.14■□□□□ 0.17
CHKB-201ENST00000406938 PAIP2BQ9ULR5 123 aaKnown RBP16.14■□□□□ 0.17
CHKB-201ENST00000406938 STRAPQ9Y3F4 350 aaKnown RBP16.14■□□□□ 0.17
CHKB-201ENST00000406938 U3KQ87 197 aa16.14■□□□□ 0.17
CHKB-201ENST00000406938 C15orf62A8K5M9 175 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 TRIM77I1YAP6 450 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 HKR1P10072 659 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 NPY1RP25929 384 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 SNCAP37840 140 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 HTR2BP41595 481 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 ECSCRQ19T08 205 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 BSXQ3C1V8 233 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 C19orf35Q6ZS72 473 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 TMEM252Q8N6L7 170 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 TMEM170AQ8WVE7 144 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 AQP10Q96PS8 301 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 MFFQ9GZY8 342 aa16.13■□□□□ 0.17
CHKB-201ENST00000406938 NUP62P37198 522 aaPredicted RBP16.12■□□□□ 0.17
CHKB-201ENST00000406938 AP2S1P53680 142 aaPredicted RBP16.12■□□□□ 0.17
CHKB-201ENST00000406938 RPP30P78346 268 aaKnown RBP16.12■□□□□ 0.17
CHKB-201ENST00000406938 TMEM14EPQ6UXP3 125 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 FAM181BA6NEQ2 426 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 RNASE1P07998 156 aaKnown RBP16.12■□□□□ 0.17
CHKB-201ENST00000406938 METTL15P1P0C7V9 234 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 RNASE2P10153 161 aaKnown RBP16.12■□□□□ 0.17
CHKB-201ENST00000406938 CXCL2P19875 107 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 UBA52P62987 128 aaKnown RBP16.12■□□□□ 0.17
CHKB-201ENST00000406938 EWSR1Q01844 656 aaKnown RBP eCLIP16.12■□□□□ 0.17
CHKB-201ENST00000406938 JMJD8Q96S16 334 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 P2RX4Q99571 388 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 PRSS22Q9GZN4 317 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 SLC25A31Q9H0C2 315 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 ZNF702PQ9H963 129 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 ZC4H2Q9NQZ6 224 aa16.12■□□□□ 0.17
CHKB-201ENST00000406938 CST7O76096 145 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 IGF1P05019 195 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 CRIP2P52943 208 aaPredicted RBP16.11■□□□□ 0.17
CHKB-201ENST00000406938 TMEM95Q3KNT9 176 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 UNQ5815/PRO19632Q6UWF5 114 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 ACOT7LQ6ZUV0 252 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 STX12Q86Y82 276 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 C9orf62Q8N4C0 152 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 ZNF114Q8NC26 417 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 LINC00527Q9UJ94 153 aa16.11■□□□□ 0.17
CHKB-201ENST00000406938 NPIPB5A8MRT5 1133 aa16.1■□□□□ 0.17
CHKB-201ENST00000406938 G3V318 75 aa16.1■□□□□ 0.17
CHKB-201ENST00000406938 OR8U8P0C7N1 319 aa16.1■□□□□ 0.17
CHKB-201ENST00000406938 CTRB1P17538 263 aa16.1■□□□□ 0.17
CHKB-201ENST00000406938 SULT1A1P50225 295 aa16.1■□□□□ 0.17
CHKB-201ENST00000406938 ZNF345Q14585 488 aa16.1■□□□□ 0.17
CHKB-201ENST00000406938 C2orf83Q53S99 150 aa16.1■□□□□ 0.17
CHKB-201ENST00000406938 CTRB2Q6GPI1 263 aa16.1■□□□□ 0.17
CHKB-201ENST00000406938 F11RQ9Y624 299 aaKnown RBP16.1■□□□□ 0.17
CHKB-201ENST00000406938 TRAV41A0A0B4J266 112 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 AP4M1O00189 453 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 FBXO24O75426 580 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 NHLH2Q02577 135 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 BAXQ07812 192 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 OR2F1Q13607 317 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 LGALSLQ3ZCW2 172 aaPredicted RBP16.09■□□□□ 0.17
CHKB-201ENST00000406938 LAMTOR1Q6IAA8 161 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 OR8G2PQ6IF36 304 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 TTC9CQ8N5M4 171 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 TMEM217Q8N7C4 229 aa16.09■□□□□ 0.17
CHKB-201ENST00000406938 NOL4LQ96MY1 436 aaPredicted RBP16.09■□□□□ 0.17
CHKB-201ENST00000406938 TCF21O43680 179 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 CRYGCP07315 174 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 SUB1P53999 127 aaKnown RBP eCLIP16.08■□□□□ 0.17
CHKB-201ENST00000406938 RAB11AP62491 216 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 AKIRIN2Q53H80 203 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 C19orf54Q5BKX5 351 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 ARSJQ5FYB0 599 aaPredicted RBP16.08■□□□□ 0.17
CHKB-201ENST00000406938 HAPLN4Q86UW8 402 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 OR1P1Q8NH06 330 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 BSCL2Q96G97 398 aaPredicted RBP16.08■□□□□ 0.17
CHKB-201ENST00000406938 TMEM68Q96MH6 324 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 HSPB11Q9Y547 144 aa16.08■□□□□ 0.17
CHKB-201ENST00000406938 PMS2P5A8MQ11 134 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 IFNA4P05014 189 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 DEFA4P12838 97 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 MFAP2P55001 183 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 ATP5IP56385 69 aaPredicted RBP16.08■□□□□ 0.16
CHKB-201ENST00000406938 ARL16Q0P5N6 197 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 ETV3LQ6ZN32 361 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 Q8N2B8 174 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 OR5T1Q8NG75 326 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 FAM110DQ8TAY7 271 aaPredicted RBP16.08■□□□□ 0.16
CHKB-201ENST00000406938 WNT10AQ9GZT5 417 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 DMRT1Q9Y5R6 373 aa16.08■□□□□ 0.16
CHKB-201ENST00000406938 RPL15P61313 204 aaKnown RBP16.07■□□□□ 0.16
CHKB-201ENST00000406938 STPG2Q8N412 459 aa16.07■□□□□ 0.16
CHKB-201ENST00000406938 KCNRGQ8N5I3 272 aa16.07■□□□□ 0.16
CHKB-201ENST00000406938 TAF15Q92804 592 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHKB-201ENST00000406938 A0A0D9SG52 128 aa16.06■□□□□ 0.16
CHKB-201ENST00000406938 PRH1P02810 166 aa16.06■□□□□ 0.16
CHKB-201ENST00000406938 SMIM3Q9BZL3 60 aa16.06■□□□□ 0.16
CHKB-201ENST00000406938 ARL6Q9H0F7 186 aa16.06■□□□□ 0.16
CHKB-201ENST00000406938 FBXL17Q9UF56 701 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms