RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 TET1Q8NFU7 2136 aa11.15□□□□□ -0.62
CACNA1C-222ENST00000406454 FBXL7Q9UJT9 491 aa11.15□□□□□ -0.62
CACNA1C-222ENST00000406454 IGHV3OR16-13A0A075B7E8 117 aa11.15□□□□□ -0.62
CACNA1C-222ENST00000406454 IGHV3-74A0A0B4J1X5 117 aa11.15□□□□□ -0.62
CACNA1C-222ENST00000406454 A8MXK9 166 aa11.15□□□□□ -0.62
CACNA1C-222ENST00000406454 COX6CP09669 75 aa11.15□□□□□ -0.62
CACNA1C-222ENST00000406454 RNASE6Q93091 150 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-222ENST00000406454 COX11Q9Y6N1 276 aa11.15□□□□□ -0.62
CACNA1C-222ENST00000406454 GPX4P36969 197 aaPredicted RBP11.15□□□□□ -0.63
CACNA1C-222ENST00000406454 PATJQ8NI35 1801 aa11.15□□□□□ -0.63
CACNA1C-222ENST00000406454 IGHV3OR16-12A0A075B7B8 117 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 BIVMQ86UB2 503 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 CACNG8Q8WXS5 425 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 FOXI3A8MTJ6 420 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 TCF21O43680 179 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 TSPOP30536 169 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 FOXG1P55316 489 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 Q5PR19 223 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 ELOVL1Q9BW60 279 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 COL25A1Q9BXS0 654 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 S4R3C0 116 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 SAA1P0DJI8 122 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 CLDND2Q8NHS1 167 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 FOXA2Q9Y261 457 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 DICER1Q9UPY3 1922 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 CHD3Q12873 2000 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 CKAP5Q14008 2032 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 TMEM238LA0A1B0GVL6 79 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 A6NJY4 79 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 CDK2AP2O75956 126 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 IGKV3-15P01624 115 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 TCF24Q7RTU0 167 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 NPFFR1Q9GZQ6 430 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 C21orf62Q9NYP8 219 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 UPK2O00526 184 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 FAM169BQ8N8A8 192 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 IGKV1D-8A0A087WSZ0 117 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 IGKV1-12A0A0C4DH73 117 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 GRIFINA4D1Z8 144 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 IGKV1D-12P01611 117 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 HINT1P49773 126 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 RNASEH2CQ8TDP1 164 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 DUX5Q96PT3 197 aa11.14□□□□□ -0.63
CACNA1C-222ENST00000406454 PPP1R27Q86WC6 154 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 TEX45Q8NA69 505 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 TFF1P04155 84 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 DLX6P56179 175 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 RRN3P1Q2M238 152 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 KLHDC3Q9BQ90 382 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 ZNF646O15015 1829 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 MORN2Q502X0 79 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 ARPC1AQ92747 370 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 LCTP09848 1927 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 FANCMQ8IYD8 2048 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 ATP5G3P48201 142 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 HBBP68871 147 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 HIST1H1AQ02539 215 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 RALGAPA1Q6GYQ0 2036 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 HOXA3O43365 443 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 OR52E5Q8NH55 327 aa11.13□□□□□ -0.63
CACNA1C-222ENST00000406454 PPP1R17O96001 155 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 GPR82Q96P67 336 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 SCO2A0A1W2PP80 73 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 H0YIZ8 118 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 FOLR2P14207 255 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 OR13C6PQ8NH95 151 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 CDKN1AP38936 164 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 PEX7O00628 323 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 ZNF324BQ6AW86 544 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 OR10AG1Q8NH19 301 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 CBLN1P23435 193 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 MBNL2Q5VZF2 373 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 WFIKKN1Q96NZ8 548 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 TMEM95Q3KNT9 176 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 FAM168AQ92567 244 aa11.12□□□□□ -0.63
CACNA1C-222ENST00000406454 RBFOX2O43251 390 aaKnown RBP eCLIP11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 GATA2P23769 480 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 TMEM144Q7Z5S9 345 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 IL36BQ9NZH7 164 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 RAXQ9Y2V3 346 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 ID3Q02535 119 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 WNT10AQ9GZT5 417 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 C15orf61A6NNL5 157 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 PLP1P60201 277 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 Q0VFX4 171 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 FOXF2Q12947 444 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 ZCCHC24Q8N2G6 241 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
CACNA1C-222ENST00000406454 IGHV3-49A0A0A0MS15 119 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 SLC17A3O00476 420 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 TMEM133Q9H2Q1 129 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 SDF2L1Q9HCN8 221 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 CACNA1BQ00975 2339 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 ZNF407Q9C0G0 2248 aa11.1□□□□□ -0.63
CACNA1C-222ENST00000406454 HLA-DRB1P01911 266 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms