RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PRTN3P24158 256 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 S100A4P26447 101 aaKnown RBP7.46□□□□□ -1.21
LIG4-202ENST00000405925 ATP5G2Q06055 141 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 KRTAP27-1Q3LI81 207 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 Q5PR19 223 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 TPTE2P1Q5T6R2 138 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 C11orf53Q8IXP5 236 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 ZNF383Q8NA42 475 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 CHRDL1Q9BU40 450 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 RNF126Q9BV68 326 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 WDR61Q9GZS3 305 aaKnown RBP7.46□□□□□ -1.21
LIG4-202ENST00000405925 LINC00527Q9UJ94 153 aa7.46□□□□□ -1.21
LIG4-202ENST00000405925 IGKV1-5P01602 117 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 FCGR2BP31994 310 aaPredicted RBP7.46□□□□□ -1.22
LIG4-202ENST00000405925 TFPI2P48307 235 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 DUX5Q96PT3 197 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 FBXL7Q9UJT9 491 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 NAV3Q8IVL0 2385 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 IGHV3OR16-8A0A075B7F1 116 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 WIPF3A6NGB9 483 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 NDUFS8O00217 210 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 IL4P05112 153 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 PAX6P26367 422 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 PAX5Q02548 391 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 GUSBP1Q15486 140 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 MSMPQ1L6U9 139 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 KHDC3LQ587J8 217 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 TEX36Q5VZQ5 186 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 NABP2Q9BQ15 211 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 WNT10AQ9GZT5 417 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 DNAJC4Q9NNZ3 241 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 RPRMQ9NS64 109 aa7.46□□□□□ -1.22
LIG4-202ENST00000405925 TMEM218A2RU14 115 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 XKRY2A2RUG3 117 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 BMPR1BO00238 502 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 CLN5O75503 358 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 AGAP20933 346 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 GALR1P47211 349 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 STPG3Q8N7X2 389 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 LINC00052Q96N35 136 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 SAMD10Q9BYL1 202 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 BUB1B-PAK6H3BSN5 160 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 H3BTX0 84 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 H3BUX3 64 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 J3KRW8 73 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 RRHO14718 337 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 TEX45Q8NA69 505 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 OR10W1Q8NGF6 305 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 METTL26Q96S19 204 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 AURKAIP1Q9NWT8 199 aaPredicted RBP7.45□□□□□ -1.22
LIG4-202ENST00000405925 C21orf62Q9NYP8 219 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 IGHV3-49A0A0A0MS15 119 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 NPFFO15130 113 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 MMP23AO75900 390 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 IGHV3-11P01762 117 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 MSMBP08118 114 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 IGFBP2P18065 325 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 ZP3P21754 424 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 GPR183P32249 361 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 SAA4P35542 130 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 ARL3P36405 182 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 FBXL19-AS1Q494R0 122 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 MINOS1Q5TGZ0 78 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 PQLC2Q6ZP29 291 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 BPIFA4PQ86YQ2 179 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 EEF1AKMT3Q96AZ1 226 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 NPFFR1Q9GZQ6 430 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 CTDSP1Q9GZU7 261 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 LIME1Q9H400 295 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 MINOS1-NBL1R4GNA1 71 aa7.45□□□□□ -1.22
LIG4-202ENST00000405925 NUP210LQ5VU65 1888 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 TRAV30A0A087WSZ9 112 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 ZNF705GA8MUZ8 300 aaPredicted RBP7.44□□□□□ -1.22
LIG4-202ENST00000405925 IGKV1-16P04430 117 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 GATA2P23769 480 aaPredicted RBP7.44□□□□□ -1.22
LIG4-202ENST00000405925 RPL35P42766 123 aaKnown RBP7.44□□□□□ -1.22
LIG4-202ENST00000405925 IFITM2Q01629 132 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 TFF3Q07654 80 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 LAMTOR1Q6IAA8 161 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 C22orf34Q6ZV56 151 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 FOXA2Q9Y261 457 aaPredicted RBP7.44□□□□□ -1.22
LIG4-202ENST00000405925 TRAV3A0A0B4J244 114 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 DBX1A6NMT0 343 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 H0YJW9 148 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 CHEK1O14757 476 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 SPINK4O60575 86 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 BCL2P10415 239 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 NMSQ5H8A3 153 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 NPCDR1Q9BY65 106 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 NAGKQ9UJ70 344 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 HSPB1P04792 205 aaKnown RBP7.44□□□□□ -1.22
LIG4-202ENST00000405925 C8orf88P0DMB2 117 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 ZNF137PP52743 207 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 PAFAH1B2P68402 229 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 PRCDQ00LT1 54 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 BSXQ3C1V8 233 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 Q8NFD4 153 aa7.44□□□□□ -1.22
LIG4-202ENST00000405925 OR51G1Q8NGK1 321 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms