RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 QTRT1Q9BXR0 403 aaKnown RBP13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 TMEM189A5PLL7 270 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 H0YJW9 148 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 J3QT63 122 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 CA2P00918 260 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 IGFBP2P18065 325 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 PLP2Q04941 152 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 VWC2Q2TAL6 325 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 PRR31Q5SQ13 230 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 MRPL18Q9H0U6 180 aaKnown RBP13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 ST20Q9HBF5 79 aa13.45□□□□□ -0.26
COL4A3BP-204ENST00000405807 FOLR3P41439 243 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 GNB1P62873 340 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 OR1L1Q8NH94 360 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 NINJ1Q92982 152 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 RAX2Q96IS3 184 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 GPR82Q96P67 336 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 KCNIP2Q9NS61 270 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 TNRC6BQ9UPQ9 1833 aaKnown RBP13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 H3BUT2 72 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 OR2H2O95918 312 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 P0C879 139 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 ZNF645Q8N7E2 425 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 SGMS2Q8NHU3 365 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 NAA38Q9BRA0 125 aaKnown RBP13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 GNB4Q9HAV0 340 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 GP6Q9HCN6 339 aa13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 MBNL3Q9NUK0 354 aaKnown RBP13.44□□□□□ -0.26
COL4A3BP-204ENST00000405807 A0A1W2PS18 150 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 ZNF503-AS2A6NEH8 195 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 J3QR89 54 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 ZG16O60844 167 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 NDUFB4O95168 129 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 NGBQ9NPG2 151 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 CRYAAP02489 173 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 LINC00869P0C866 280 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 CA6P23280 308 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 CA7P43166 264 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 FABP6P51161 128 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 Q56UQ5 140 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 ZNF841Q6ZN19 808 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 Q8IYB0 196 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 OR5A1Q8NGJ0 315 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 NDFIP1Q9BT67 221 aa13.43□□□□□ -0.26
COL4A3BP-204ENST00000405807 COL6A3P12111 3177 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 ZNF816Q0VGE8 651 aaPredicted RBP13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 SAP25Q8TEE9 199 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 KCNS1Q96KK3 526 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 MDFIC2A0A1B0GVS7 189 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 C9orf118A6NHY6 69 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 EGR1P18146 543 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 FOXG1P55316 489 aaPredicted RBP13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 CATR1Q13166 79 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 SRSF6Q13247 344 aaKnown RBP13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 C19orf35Q6ZS72 473 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 NEU4Q8WWR8 484 aaPredicted RBP13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 GMPPAQ96IJ6 420 aaPredicted RBP13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 DEPPQ9NTK1 212 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 KCNIP1Q9NZI2 227 aa13.42□□□□□ -0.26
COL4A3BP-204ENST00000405807 ATP5G3P48201 142 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 RPS16P62249 146 aaKnown RBP13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 FAM19A2Q8N3H0 131 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 SPEM1Q8N4L4 309 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 TXNDC17Q9BRA2 123 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 SLC17A3O00476 420 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 SRYQ05066 204 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 HLA-DRB5Q30154 266 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 OR10AG1Q8NH19 301 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 ZDHHC16Q969W1 377 aa13.41□□□□□ -0.26
COL4A3BP-204ENST00000405807 DEFA4P12838 97 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 SLC25A34Q6PIV7 304 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 RTL8AQ9BWD3 113 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 OR2D2Q9H210 308 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 A0A087X0K7 114 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 CLDN14O95500 239 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 REG1AP05451 166 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 NTF3P20783 257 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 THBS3P49746 956 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 RPL30P62888 115 aaKnown RBP13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 MRPL54Q6P161 138 aaKnown RBP13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 H2BFWTQ7Z2G1 175 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 RCHY1Q96PM5 261 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 CLCF1Q9UBD9 225 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 POLDIP2Q9Y2S7 368 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 FREM2Q5SZK8 3169 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 ARHGAP21Q5T5U3 1957 aa13.4□□□□□ -0.26
COL4A3BP-204ENST00000405807 CCL4P13236 92 aa13.4□□□□□ -0.27
COL4A3BP-204ENST00000405807 NPY1RP25929 384 aa13.4□□□□□ -0.27
COL4A3BP-204ENST00000405807 FOXI2Q6ZQN5 318 aa13.4□□□□□ -0.27
COL4A3BP-204ENST00000405807 B4GALT7Q9UBV7 327 aa13.4□□□□□ -0.27
COL4A3BP-204ENST00000405807 SPCS1Q9Y6A9 102 aa13.4□□□□□ -0.27
COL4A3BP-204ENST00000405807 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 TRAV25A0A0B4J276 109 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 ATP5G2Q06055 141 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 ZNF808Q8N4W9 903 aaPredicted RBP13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 ZNF114Q8NC26 417 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 ANAPC13Q9BS18 74 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 MS4A5Q9H3V2 200 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms