RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 DNHD1Q96M86 4753 aa22.83■■□□□ 1.25
USP42-202ENST00000404008 OXA1LQ15070 435 aa22.82■■□□□ 1.24
USP42-202ENST00000404008 TATDN3Q17R31 274 aa22.82■■□□□ 1.24
USP42-202ENST00000404008 OR2C3Q8N628 320 aa22.82■■□□□ 1.24
USP42-202ENST00000404008 TRBV9A0A0B4J1U6 114 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 A0A1W2PRX2 142 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 DEFA4P12838 97 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 CDX1P47902 265 aaPredicted RBP22.81■■□□□ 1.24
USP42-202ENST00000404008 HOXA1P49639 335 aaPredicted RBP22.81■■□□□ 1.24
USP42-202ENST00000404008 KLK9Q2XQG4 91 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 NSUN5P1Q3KNT7 163 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 OR10C1Q96KK4 312 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 UBE2E2Q96LR5 201 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 FANCD2OSQ96PS1 177 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 KLK9Q9UKQ9 250 aa22.81■■□□□ 1.24
USP42-202ENST00000404008 VWFP04275 2813 aa22.8■■□□□ 1.24
USP42-202ENST00000404008 C7orf66A4D0T2 115 aa22.8■■□□□ 1.24
USP42-202ENST00000404008 CCSO14618 274 aa22.8■■□□□ 1.24
USP42-202ENST00000404008 ERHP84090 104 aaKnown RBP22.8■■□□□ 1.24
USP42-202ENST00000404008 C18orf65Q6ZTR6 163 aa22.8■■□□□ 1.24
USP42-202ENST00000404008 ENY2Q9NPA8 101 aa22.8■■□□□ 1.24
USP42-202ENST00000404008 DMRT1Q9Y5R6 373 aa22.8■■□□□ 1.24
USP42-202ENST00000404008 F11RQ9Y624 299 aaKnown RBP22.8■■□□□ 1.24
USP42-202ENST00000404008 IGLV11-55A0A075B6I3 123 aa22.79■■□□□ 1.24
USP42-202ENST00000404008 ZNF114Q8NC26 417 aa22.79■■□□□ 1.24
USP42-202ENST00000404008 CEBPZOSA8MTT3 80 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 FAM90A26D6RGX4 464 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 RHOGP84095 191 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 DEFA5Q01523 94 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 IAH1Q2TAA2 248 aaPredicted RBP22.78■■□□□ 1.24
USP42-202ENST00000404008 NECAP1Q8NC96 275 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 KLHL30-AS1Q8NEE0 82 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 P2RX4Q99571 388 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 RBKSQ9H477 322 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 GNB4Q9HAV0 340 aa22.78■■□□□ 1.24
USP42-202ENST00000404008 FAM223BA6NKX1 122 aa22.77■■□□□ 1.24
USP42-202ENST00000404008 HIST1H1BP16401 226 aaKnown RBP22.77■■□□□ 1.24
USP42-202ENST00000404008 C2orf68Q2NKX9 166 aa22.77■■□□□ 1.24
USP42-202ENST00000404008 FAM223AQ8IWN6 122 aa22.77■■□□□ 1.24
USP42-202ENST00000404008 OR4D5Q8NGN0 318 aa22.77■■□□□ 1.24
USP42-202ENST00000404008 ALG5Q9Y673 324 aa22.77■■□□□ 1.24
USP42-202ENST00000404008 TRRAPQ9Y4A5 3859 aa22.77■■□□□ 1.24
USP42-202ENST00000404008 OR2J3O76001 311 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 MFAP2P55001 183 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 OR1P1Q8NH06 330 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 C4orf3Q8WVX3 66 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 USMG5Q96IX5 58 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 A0A0G2JLM5 398 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 C13orf42A0A1B0GVH6 325 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 NUDT19A8MXV4 375 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 CYB5BO43169 146 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 ZBTB8BQ8NAP8 495 aaPredicted RBP22.76■■□□□ 1.23
USP42-202ENST00000404008 OR1L6Q8NGR2 347 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 HEYLQ9NQ87 328 aaPredicted RBP22.76■■□□□ 1.23
USP42-202ENST00000404008 FBXL7Q9UJT9 491 aa22.76■■□□□ 1.23
USP42-202ENST00000404008 FAM25EA8MYX2 175 aa22.75■■□□□ 1.23
USP42-202ENST00000404008 SNCAP37840 140 aa22.75■■□□□ 1.23
USP42-202ENST00000404008 C11orf87Q6NUJ2 197 aa22.75■■□□□ 1.23
USP42-202ENST00000404008 DTD1Q8TEA8 209 aa22.75■■□□□ 1.23
USP42-202ENST00000404008 C5orf51A6NDU8 294 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 M0QZ24 198 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 SSNA1O43805 119 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 IGHV3-11P01762 117 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 ID3Q02535 119 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 C15orf32Q32M92 178 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 BSXQ3C1V8 233 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 SLC25A24Q6NUK1 477 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 C8orf86Q6ZUL3 223 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 HIPK2Q9H2X6 1198 aa22.74■■□□□ 1.23
USP42-202ENST00000404008 I3L521 148 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 MED6O75586 246 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 NDUFB8O95169 186 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 RNASE2P10153 161 aaKnown RBP22.73■■□□□ 1.23
USP42-202ENST00000404008 RUNX1Q01196 453 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 ATP5G2Q06055 141 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 GSG1LQ6UXU4 331 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 OR5B12Q96R08 314 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 MAGT1Q9H0U3 335 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 THYN1Q9P016 225 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 GSKIPQ9P0R6 139 aa22.73■■□□□ 1.23
USP42-202ENST00000404008 GOSR2O14653 212 aa22.72■■□□□ 1.23
USP42-202ENST00000404008 LGALS1P09382 135 aaKnown RBP22.72■■□□□ 1.23
USP42-202ENST00000404008 HTR2BP41595 481 aa22.72■■□□□ 1.23
USP42-202ENST00000404008 NKX2-1P43699 371 aaPredicted RBP22.72■■□□□ 1.23
USP42-202ENST00000404008 C2orf50Q96LR7 162 aa22.72■■□□□ 1.23
USP42-202ENST00000404008 SYNGR2O43760 224 aa22.71■■□□□ 1.23
USP42-202ENST00000404008 SUB1P53999 127 aaKnown RBP eCLIP22.71■■□□□ 1.23
USP42-202ENST00000404008 PVRIGQ6DKI7 326 aa22.71■■□□□ 1.23
USP42-202ENST00000404008 PKD1L1Q8TDX9 2849 aa22.7■■□□□ 1.23
USP42-202ENST00000404008 TSPAN15O95858 294 aa22.7■■□□□ 1.22
USP42-202ENST00000404008 DEFB136Q30KP8 78 aa22.7■■□□□ 1.22
USP42-202ENST00000404008 SLC24A4Q8NFF2 622 aa22.7■■□□□ 1.22
USP42-202ENST00000404008 OR4F17Q8NGA8 305 aa22.7■■□□□ 1.22
USP42-202ENST00000404008 OR4F4Q96R69 305 aa22.7■■□□□ 1.22
USP42-202ENST00000404008 EXOSC2Q13868 293 aaKnown RBP22.69■■□□□ 1.22
USP42-202ENST00000404008 ZNF343Q6P1L6 599 aa22.69■■□□□ 1.22
USP42-202ENST00000404008 SCGB1D2O95969 90 aa22.68■■□□□ 1.22
USP42-202ENST00000404008 IAPPP10997 89 aa22.68■■□□□ 1.22
USP42-202ENST00000404008 POLR2GP62487 172 aaKnown RBP eCLIP22.68■■□□□ 1.22
USP42-202ENST00000404008 C2orf83Q53S99 150 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms