RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 AARDQ4LEZ3 155 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 NECAP1Q8NC96 275 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DUSP18Q8NEJ0 188 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 OR11H1Q8NG94 326 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 OR1N2Q8NGR9 330 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 COQ8AQ8NI60 647 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 USMG5Q96IX5 58 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 SEC22CQ9BRL7 303 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 PLEKHA3Q9HB20 300 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 IGLV11-55A0A075B6I3 123 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 PIGBOS1A0A0B4J2F0 54 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 ANKRD34BA5PLL1 514 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 FAM223BA6NKX1 122 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 ADAP1O75689 374 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 MFAP2P55001 183 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 SPCS3P61009 180 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 SMCO1Q147U7 214 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 KLK9Q2XQG4 91 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 GGNBP1Q5YKI7 109 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 SLC25A24Q6NUK1 477 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 FAM223AQ8IWN6 122 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 OR2C3Q8N628 320 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 P2RX4Q99571 388 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 KLK9Q9UKQ9 250 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 F11RQ9Y624 299 aaKnown RBP13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 S4R3C0 116 aa13.29□□□□□ -0.28
PTCHD3P3-201ENST00000403073 A0A1B0GU03 582 aa13.28□□□□□ -0.28
PTCHD3P3-201ENST00000403073 HIST1H1BP16401 226 aaKnown RBP13.28□□□□□ -0.28
PTCHD3P3-201ENST00000403073 ERHP84090 104 aaKnown RBP13.28□□□□□ -0.28
PTCHD3P3-201ENST00000403073 C15orf32Q32M92 178 aa13.28□□□□□ -0.28
PTCHD3P3-201ENST00000403073 MRPL41Q8IXM3 137 aaKnown RBP13.28□□□□□ -0.28
PTCHD3P3-201ENST00000403073 OR52E5Q8NH55 327 aa13.28□□□□□ -0.28
PTCHD3P3-201ENST00000403073 MITD1Q8WV92 249 aa13.28□□□□□ -0.28
PTCHD3P3-201ENST00000403073 TMED3Q9Y3Q3 217 aa13.28□□□□□ -0.28
PTCHD3P3-201ENST00000403073 TNCP24821 2201 aa13.27□□□□□ -0.28
PTCHD3P3-201ENST00000403073 IGHV4OR15-8A0A075B7B6 117 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 A0A087WW49 117 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 IGHV3-23P01764 117 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 HSPB1P04792 205 aaKnown RBP13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 SPNP16150 400 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 HOXA1P49639 335 aaPredicted RBP13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 ZNF343Q6P1L6 599 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 LINC00482Q8N8I6 264 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 OR1S1Q8NH92 325 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 DPF1Q92782 380 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 ENY2Q9NPA8 101 aa13.27□□□□□ -0.29
PTCHD3P3-201ENST00000403073 CEBPZOSA8MTT3 80 aa13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 MPTX1A8MV57 137 aa13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 PITX3O75364 302 aa13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 TRBV12-3P01733 135 aa13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 ZNF616Q08AN1 781 aa13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 EXOSC2Q13868 293 aaKnown RBP13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 PDLIM3Q53GG5 364 aaPredicted RBP13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 C11orf87Q6NUJ2 197 aa13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 PLET1Q6UQ28 207 aa13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 UXS1Q8NBZ7 420 aa13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 ZNF431Q8TF32 576 aaPredicted RBP13.26□□□□□ -0.29
PTCHD3P3-201ENST00000403073 INMT-MINDY4F8WBC2 141 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 LINC01619G3V211 115 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 CYB5BO43169 146 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 SLC25A6P12236 298 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 CD33P20138 364 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 SNCAP37840 140 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 TNFRSF9Q07011 255 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 FHL3Q13643 280 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 WFDC9Q8NEX5 89 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 OR1P1Q8NH06 330 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 RBKSQ9H477 322 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 HEYLQ9NQ87 328 aaPredicted RBP13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 THYN1Q9P016 225 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 PEF1Q9UBV8 284 aaKnown RBP13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 HSPB7Q9UBY9 170 aa13.25□□□□□ -0.29
PTCHD3P3-201ENST00000403073 TRRAPQ9Y4A5 3859 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 VWFP04275 2813 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 IGHV3-21A0A0B4J1V1 117 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 MFSD2BA6NFX1 497 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 IFNA21P01568 189 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 IL5P05113 134 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 SLURP1P55000 103 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 C12orf45Q8N5I9 185 aaPredicted RBP13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 MISP3Q96FF7 219 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 MARVELD1Q9BSK0 173 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 RANGRFQ9HD47 186 aaPredicted RBP13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 CACFD1Q9UGQ2 172 aa13.24□□□□□ -0.29
PTCHD3P3-201ENST00000403073 OR8U8P0C7N1 319 aa13.23□□□□□ -0.29
PTCHD3P3-201ENST00000403073 RNASE2P10153 161 aaKnown RBP13.23□□□□□ -0.29
PTCHD3P3-201ENST00000403073 CLEC19AQ6UXS0 136 aa13.23□□□□□ -0.29
PTCHD3P3-201ENST00000403073 EEF1AKMT3Q96AZ1 226 aa13.23□□□□□ -0.29
PTCHD3P3-201ENST00000403073 CXorf58Q96LI9 332 aa13.23□□□□□ -0.29
PTCHD3P3-201ENST00000403073 CCSO14618 274 aa13.22□□□□□ -0.29
PTCHD3P3-201ENST00000403073 IGLL1P15814 213 aa13.22□□□□□ -0.29
PTCHD3P3-201ENST00000403073 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTCHD3P3-201ENST00000403073 VN1R17PQ8TDU5 208 aa13.22□□□□□ -0.29
PTCHD3P3-201ENST00000403073 SCARB1Q8WTV0 552 aa13.22□□□□□ -0.29
PTCHD3P3-201ENST00000403073 DCUN1D4Q92564 292 aa13.22□□□□□ -0.29
PTCHD3P3-201ENST00000403073 DLX4Q92988 240 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms