RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 FOLR2P14207 255 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 S100GP29377 79 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 RPL5P46777 297 aaKnown RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 MECP2P51608 486 aaKnown RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 TMBIM6P55061 237 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 PIGPP57054 158 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 IL18Q14116 193 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 KLK9Q2XQG4 91 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 SP6Q3SY56 376 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 CD300EQ496F6 205 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 TM4SF20Q53R12 229 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 LCN12Q6JVE5 192 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 SLC25A24Q6NUK1 477 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 STEAP1BQ6NZ63 245 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 LPCAT3Q6P1A2 487 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 UNQ9165/PRO28630Q6UXU0 137 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 H2BFWTQ7Z2G1 175 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 LHFPL1Q86WI0 220 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 ARRDC1Q8N5I2 433 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 GDPD1Q8N9F7 314 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 TMEM229BQ8NBD8 167 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR13C8Q8NGS7 320 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF502Q8TBZ5 544 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 MARCH1Q8TCQ1 289 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 DYNLRB2Q8TF09 96 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 SMIM4Q8WVI0 70 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 LSM10Q969L4 123 aaKnown RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 ISOC1Q96CN7 298 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 DIRAS2Q96HU8 199 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 TP53RKQ96S44 253 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 THAP7Q9BT49 309 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 WFDC10AQ9H1F0 79 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 NDUFA4L2Q9NRX3 87 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 TMEM14BQ9NUH8 114 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 CCDC59Q9P031 241 aaKnown RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 PEMTQ9UBM1 199 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 PRNDQ9UKY0 176 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 F11RQ9Y624 299 aaKnown RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGHV3OR16-8A0A075B7F1 116 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TRBV7-1A0A0A6YYK4 115 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 A0A0G2JRQ6 117 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 C3orf85A0A1B0GTC6 90 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TMEM213A2RRL7 107 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR2T8A6NH00 312 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF785A8K8V0 405 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 K7EIM0 57 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 LGALS9O00182 355 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TGOLN2O43493 480 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 NOL3O60936 208 aaKnown RBP4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TPPPO94811 219 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGHV3-48P01763 117 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 FGF2P09038 288 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 CD7P09564 240 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TBPP20226 339 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 PTBP1P26599 531 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TNFSF8P32971 234 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 AKR1C2P52895 323 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TAS2R19P59542 299 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 RND3P61587 244 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 GUCA2BQ16661 112 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 DEFB114Q30KQ6 69 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 FAM209BQ5JX69 171 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 PLET1Q6UQ28 207 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 GPHB5Q86YW7 130 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 SGPP2Q8IWX5 399 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 Q8N402 240 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 UBAC2Q8NBM4 344 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 UXS1Q8NBZ7 420 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR4C16Q8NGL9 310 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR4A16Q8NH70 328 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TERB2Q8NHR7 220 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 SCARB1Q8WTV0 552 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 C15orf40Q8WUR7 153 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 CXorf58Q96LI9 332 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 WWC2-AS2Q96NR7 200 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 BCL7BQ9BQE9 202 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 SRSF8Q9BRL6 282 aaKnown RBP4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 CHRDL1Q9BU40 450 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 SLIRPQ9GZT3 109 aaKnown RBP4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 PLEKHA3Q9HB20 300 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 FAM212BQ9NTI7 297 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 SIGLEC8Q9NYZ4 499 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 COPZ2Q9P299 210 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 MLXQ9UH92 298 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 CEPT1Q9Y6K0 416 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 DNAH7Q8WXX0 4024 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 TENM2Q9NT68 2774 aa4.35□□□□□ -1.71
HMGB1P20-201ENST00000402555 A0A0B4J293 547 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 CCDC160A6NGH7 325 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 A8MWP6 167 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 DISC1C4P0D8 188 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 SCAF4O95104 1147 aaKnown RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 CTSDP07339 412 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR5AC1P0C628 307 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 P0C879 139 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 AKAIN1P0CW23 69 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 CBLN1P23435 193 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms