RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ACSM6Q6P461 480 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 PSMG3-AS1Q96PY0 264 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 VPS13CQ709C8 3753 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 PLGLAQ15195 96 aa20.45■□□□□ 0.86
CPNE1-205ENST00000401607 SPSB3Q6PJ21 355 aa20.45■□□□□ 0.86
CPNE1-205ENST00000401607 ZP3P21754 424 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 TMEM41BQ5BJD5 291 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 BPIFCQ8NFQ6 507 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 P2RX4Q99571 388 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 NPVFQ9HCQ7 196 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 KIAA1456Q9P272 454 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 LSM4Q9Y4Z0 139 aaKnown RBP20.44■□□□□ 0.86
CPNE1-205ENST00000401607 B4DSR2 109 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 TEX22C9J3V5 150 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 FNDC10F2Z333 226 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 H2AFB1P0C5Y9 115 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 MGST2Q99735 147 aa20.44■□□□□ 0.86
CPNE1-205ENST00000401607 USP9YO00507 2555 aaPredicted RBP20.43■□□□□ 0.86
CPNE1-205ENST00000401607 MPDU1O75352 247 aa20.43■□□□□ 0.86
CPNE1-205ENST00000401607 REG1AP05451 166 aa20.43■□□□□ 0.86
CPNE1-205ENST00000401607 AKR1C1Q04828 323 aa20.43■□□□□ 0.86
CPNE1-205ENST00000401607 ZNF726P1Q15940 193 aa20.43■□□□□ 0.86
CPNE1-205ENST00000401607 RUSC1-AS1Q66K80 236 aa20.43■□□□□ 0.86
CPNE1-205ENST00000401607 ZNF709Q8N972 641 aa20.43■□□□□ 0.86
CPNE1-205ENST00000401607 SRSF12Q8WXF0 261 aaKnown RBP20.43■□□□□ 0.86
CPNE1-205ENST00000401607 IGHV3OR16-10A0A075B7F0 116 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 IGHV1-69DA0A0B4J2H0 117 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 A0A1B0GV50 99 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 C17orf112F2Z3M2 114 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 IGHV1-69P01742 117 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 AREGP15514 252 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 RAB2AP61019 212 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 FAM120AOSQ5T036 256 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 HIST2H2BCQ6DN03 193 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 LRRC75A-AS1Q8N1F1 130 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 TMEM231Q9H6L2 316 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 PLXNB1O43157 2135 aa20.42■□□□□ 0.86
CPNE1-205ENST00000401607 TRAV40A0A0B4J280 105 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 KRBOX1C9JBD0 128 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 CD69Q07108 199 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 C5orf64Q2M2E5 130 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 FFAR4Q5NUL3 377 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 SSX7Q7RTT5 188 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 COMMD1Q8N668 190 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 FAM96BQ9Y3D0 163 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 TMEM11P17152 192 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 CCL20P78556 96 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 MLANAQ16655 118 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 MRPL41Q8IXM3 137 aaKnown RBP20.41■□□□□ 0.86
CPNE1-205ENST00000401607 ZNF114Q8NC26 417 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 RCC1LQ96I51 464 aaKnown RBP20.41■□□□□ 0.86
CPNE1-205ENST00000401607 SCRT1Q9BWW7 348 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 GGTLC1Q9BX51 225 aa20.41■□□□□ 0.86
CPNE1-205ENST00000401607 APELAP0DMC3 54 aa20.4■□□□□ 0.86
CPNE1-205ENST00000401607 SUB1P53999 127 aaKnown RBP eCLIP20.4■□□□□ 0.86
CPNE1-205ENST00000401607 PVRIGQ6DKI7 326 aa20.4■□□□□ 0.86
CPNE1-205ENST00000401607 RPP25LQ8N5L8 163 aaKnown RBP20.4■□□□□ 0.86
CPNE1-205ENST00000401607 SFT2D1Q8WV19 159 aa20.4■□□□□ 0.86
CPNE1-205ENST00000401607 HIF1ANQ9NWT6 349 aa20.4■□□□□ 0.86
CPNE1-205ENST00000401607 TEPPQ6URK8 271 aa20.39■□□□□ 0.86
CPNE1-205ENST00000401607 RNASEH2CQ8TDP1 164 aaKnown RBP20.39■□□□□ 0.86
CPNE1-205ENST00000401607 C7orf69Q9H7B7 122 aa20.39■□□□□ 0.86
CPNE1-205ENST00000401607 CSMD2Q7Z408 3487 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 TRAV20A0A0B4J274 112 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 FAM106CPP0CH98 169 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 BRS3P32247 399 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 OPRK1P41145 380 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 MFAP2P55001 183 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 GAMTQ14353 236 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 C19orf35Q6ZS72 473 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 LFNGQ8NES3 379 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 MBD3L1Q8WWY6 194 aa20.39■□□□□ 0.85
CPNE1-205ENST00000401607 TENM4Q6N022 2769 aa20.38■□□□□ 0.85
CPNE1-205ENST00000401607 CD5P06127 495 aa20.38■□□□□ 0.85
CPNE1-205ENST00000401607 IGHV4-38-2P0DP08 117 aa20.38■□□□□ 0.85
CPNE1-205ENST00000401607 GPX4P36969 197 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-205ENST00000401607 BRD3OSQ6XYD6 125 aa20.38■□□□□ 0.85
CPNE1-205ENST00000401607 SLC16A13Q7RTY0 426 aa20.38■□□□□ 0.85
CPNE1-205ENST00000401607 TMEM144Q7Z5S9 345 aa20.38■□□□□ 0.85
CPNE1-205ENST00000401607 CACNG8Q8WXS5 425 aa20.38■□□□□ 0.85
CPNE1-205ENST00000401607 FNDC4Q9H6D8 234 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-205ENST00000401607 TRAV1-1A0A0B4J248 108 aa20.37■□□□□ 0.85
CPNE1-205ENST00000401607 BTBD17A6NE02 478 aa20.37■□□□□ 0.85
CPNE1-205ENST00000401607 MBP02144 154 aa20.37■□□□□ 0.85
CPNE1-205ENST00000401607 LINC01356Q8N9X3 169 aa20.37■□□□□ 0.85
CPNE1-205ENST00000401607 SSMEM1Q8WWF3 244 aa20.37■□□□□ 0.85
CPNE1-205ENST00000401607 NARS2Q96I59 477 aaKnown RBP20.37■□□□□ 0.85
CPNE1-205ENST00000401607 TREM1Q9NP99 234 aa20.37■□□□□ 0.85
CPNE1-205ENST00000401607 CELSR2Q9HCU4 2923 aa20.37■□□□□ 0.85
CPNE1-205ENST00000401607 TMEM218A2RU14 115 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 NCBP2LA6PVI3 153 aaKnown RBP20.36■□□□□ 0.85
CPNE1-205ENST00000401607 CNIH1O95406 144 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 LOXL1Q08397 574 aaPredicted RBP20.36■□□□□ 0.85
CPNE1-205ENST00000401607 GUK1Q16774 197 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 Q5PR19 223 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 MIC13Q5XKP0 118 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 OR10G4Q8NGN3 311 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 OR10G9Q8NGN4 311 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 OR10G7Q8NGN6 311 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 SRSF8Q9BRL6 282 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms