RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 SLC25A1P53007 311 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 CD300CQ08708 224 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 HOGA1Q86XE5 327 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 CLDND2Q8NHS1 167 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 CHCHD1Q96BP2 118 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 GGACTQ9BVM4 153 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 NPIPB13A6NJU9 1138 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 NPIPB5A8MRT5 1133 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 UPK3AO75631 287 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 COX6A1P12074 109 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 PEBP1P30086 187 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 C5orf30Q96GV9 206 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 LRP5O75197 1615 aa9.42□□□□□ -0.9
CACNA1C-208ENST00000399601 OR2H2O95918 312 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 THBDP07204 575 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 CD24P25063 80 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 PLNP26678 52 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 DAD1P61803 113 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 FOXL1Q12952 345 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 NKAPP1Q8N9T2 125 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 UBE2E2Q96LR5 201 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 TMEFF2Q9UIK5 374 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 TRACP01848 142 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 CEACAM21Q3KPI0 293 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 C8orf31Q8N9H6 132 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 SCO2A0A1W2PP80 73 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 C6orf226Q5I0X4 101 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 C20orf204Q6ZNR8 217 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 BMPERQ8N8U9 685 aa9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 ZNF703Q9H7S9 590 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 PUSL1Q8N0Z8 303 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-208ENST00000399601 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 CGAP01215 116 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 LINC00596Q86U02 117 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 LINC00527Q9UJ94 153 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 OR9G1Q8NH87 305 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 ZNF721Q8TF20 911 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 ZNF98A6NK75 572 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 DOCK2Q92608 1830 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 TRGV1A0A0A0MS02 117 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 IGKCP01834 107 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 C8orf88P0DMB2 117 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 MPV17P39210 176 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 TAL2Q16559 108 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 TIMM23BQ5SRD1 257 aa9.4□□□□□ -0.9
CACNA1C-208ENST00000399601 PRRC2BQ5JSZ5 2229 aaKnown RBP9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 TRAV40A0A0B4J280 105 aa9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 E9PLN8 166 aa9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 ZNF362Q5T0B9 420 aaPredicted RBP9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 RFLNBQ8N5W9 214 aa9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 SPTSSBQ8NFR3 76 aa9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 PRDM13Q9H4Q3 707 aa9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 NEUROG3Q9Y4Z2 214 aa9.4□□□□□ -0.91
CACNA1C-208ENST00000399601 TINCRA0A1B0GVN0 87 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 GATA4P43694 442 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 H1FOOQ8IZA3 346 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 HRKO00198 91 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 LEPROTO15243 131 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 PTP4A3O75365 173 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 SLC50A1Q9BRV3 221 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 DOCK1Q14185 1865 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 F8VVB4 439 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 F8VWA3 439 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 SPINK8P0C7L1 97 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 RPL39P5Q59GN2 51 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 ZNF479Q96JC4 524 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 Q96MF0 132 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 J3QW42 95 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 C1QTNF9P0C862 333 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 TNFRSF12AQ9NP84 129 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 CROCCQ5TZA2 2017 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 MYO7AQ13402 2215 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 A0A096LPF7 62 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 LOC105371267A0A1B0GV96 52 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 TIMM23O14925 209 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 ORMDL3Q8N138 153 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 GATAD1Q8WUU5 269 aa9.39□□□□□ -0.91
CACNA1C-208ENST00000399601 A8MXK9 166 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 TEX22C9J3V5 150 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 MYH7BA7E2Y1 1941 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 DPM2O94777 84 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 WNT2P09544 360 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A18PA6NE21 464 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A16PA6NEW6 464 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A7PA6NKC0 464 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A22PA8MWA6 464 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A12PA8MX19 464 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A5PA8MXJ8 464 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A23PA8MXZ1 464 aa9.38□□□□□ -0.91
CACNA1C-208ENST00000399601 FAM90A15PP0C7V4 464 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms