RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
UFD1-202ENST00000399523 SPAG16Q8N0X2 631 aa12.93□□□□□ -0.34
UFD1-202ENST00000399523 FAM24BQ8N5W8 94 aa12.93□□□□□ -0.34
UFD1-202ENST00000399523 ELF5Q9UKW6 265 aaPredicted RBP12.93□□□□□ -0.34
UFD1-202ENST00000399523 LSM2Q9Y333 95 aaKnown RBP12.93□□□□□ -0.34
UFD1-202ENST00000399523 DNASE2O00115 360 aaPredicted RBP12.92□□□□□ -0.34
UFD1-202ENST00000399523 ARL6IP5O75915 188 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 YIF1AO95070 293 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 NQO2P16083 231 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 NPY1RP25929 384 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 CNIH2Q6PI25 160 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 ZNF773Q6PK81 442 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 C10orf67Q8IYJ2 551 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 LILRB2Q8N423 598 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 VSIRQ9H7M9 311 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 S100A14Q9HCY8 104 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 TMEM14BQ9NUH8 114 aa12.92□□□□□ -0.34
UFD1-202ENST00000399523 TEX50A0A1B0GTY4 177 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 RAB6AP20340 208 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 TNP2Q05952 138 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 MSMO1Q15800 293 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 RNF212Q495C1 297 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 HES5Q5TA89 166 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 DUSP18Q8NEJ0 188 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 FAM210BQ96KR6 192 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 DCSTAMPQ9H295 470 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 TMEM140Q9NV12 185 aa12.91□□□□□ -0.34
UFD1-202ENST00000399523 TNFSF12O43508 249 aa12.9□□□□□ -0.34
UFD1-202ENST00000399523 HPRT1P00492 218 aa12.9□□□□□ -0.34
UFD1-202ENST00000399523 BPIFB6Q8NFQ5 453 aa12.9□□□□□ -0.34
UFD1-202ENST00000399523 OR1L8Q8NGR8 309 aa12.9□□□□□ -0.34
UFD1-202ENST00000399523 ST8SIA2Q92186 375 aa12.9□□□□□ -0.34
UFD1-202ENST00000399523 NXF2Q9GZY0 626 aaKnown RBP12.9□□□□□ -0.34
UFD1-202ENST00000399523 NDUFA4L2Q9NRX3 87 aa12.9□□□□□ -0.34
UFD1-202ENST00000399523 CLEC5AQ9NY25 188 aa12.9□□□□□ -0.34
UFD1-202ENST00000399523 ST8SIA3O43173 380 aa12.89□□□□□ -0.35
UFD1-202ENST00000399523 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
UFD1-202ENST00000399523 ARL6IP1Q15041 203 aa12.89□□□□□ -0.35
UFD1-202ENST00000399523 UFD1Q92890 307 aa12.89□□□□□ -0.35
UFD1-202ENST00000399523 LSM10Q969L4 123 aaKnown RBP12.89□□□□□ -0.35
UFD1-202ENST00000399523 METTL21EPA6NDL7 271 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 APOHP02749 345 aaPredicted RBP12.88□□□□□ -0.35
UFD1-202ENST00000399523 EIF4EP06730 217 aaKnown RBP12.88□□□□□ -0.35
UFD1-202ENST00000399523 GNAO1P09471 354 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 RPS25P62851 125 aaKnown RBP12.88□□□□□ -0.35
UFD1-202ENST00000399523 HACD4Q5VWC8 232 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 DHRSXQ8N5I4 330 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 DMBX1Q8NFW5 382 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 TXN2Q99757 166 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 CCL28Q9NRJ3 127 aa12.88□□□□□ -0.35
UFD1-202ENST00000399523 SULT1C2O00338 296 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 MFAP4P55083 255 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 TRAM1Q15629 374 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 CDNFQ49AH0 187 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 UBE2UQ5VVX9 321 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 ZNF367Q7RTV3 350 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 ZBTB34Q8NCN2 500 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 GRAMD2BQ96HH9 432 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 ANXA10Q9UJ72 324 aa12.87□□□□□ -0.35
UFD1-202ENST00000399523 KNCNA6PVL3 124 aa12.86□□□□□ -0.35
UFD1-202ENST00000399523 I3L2K1 104 aa12.86□□□□□ -0.35
UFD1-202ENST00000399523 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
UFD1-202ENST00000399523 RPL11P62913 178 aaKnown RBP12.86□□□□□ -0.35
UFD1-202ENST00000399523 TOMM20LQ6UXN7 152 aa12.86□□□□□ -0.35
UFD1-202ENST00000399523 C8orf59Q8N0T1 100 aaPredicted RBP12.86□□□□□ -0.35
UFD1-202ENST00000399523 OR1P1Q8NH06 330 aa12.86□□□□□ -0.35
UFD1-202ENST00000399523 SECTM1Q8WVN6 248 aa12.86□□□□□ -0.35
UFD1-202ENST00000399523 RABAC1Q9UI14 185 aa12.86□□□□□ -0.35
UFD1-202ENST00000399523 IFITM5A6NNB3 132 aa12.85□□□□□ -0.35
UFD1-202ENST00000399523 K7EQG2 157 aa12.85□□□□□ -0.35
UFD1-202ENST00000399523 CATR1Q13166 79 aa12.85□□□□□ -0.35
UFD1-202ENST00000399523 SLC25A46Q96AG3 418 aa12.85□□□□□ -0.35
UFD1-202ENST00000399523 HINT2Q9BX68 163 aa12.85□□□□□ -0.35
UFD1-202ENST00000399523 COMMD9Q9P000 198 aa12.85□□□□□ -0.35
UFD1-202ENST00000399523 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
UFD1-202ENST00000399523 FABP5Q01469 135 aa12.84□□□□□ -0.35
UFD1-202ENST00000399523 ACTL10Q5JWF8 245 aa12.84□□□□□ -0.35
UFD1-202ENST00000399523 OR13F1Q8NGS4 319 aa12.84□□□□□ -0.35
UFD1-202ENST00000399523 NUDCD2Q8WVJ2 157 aa12.84□□□□□ -0.35
UFD1-202ENST00000399523 ATG5Q9H1Y0 275 aa12.84□□□□□ -0.35
UFD1-202ENST00000399523 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.36
UFD1-202ENST00000399523 OR10A3P58181 314 aa12.83□□□□□ -0.36
UFD1-202ENST00000399523 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
UFD1-202ENST00000399523 RCN1Q15293 331 aa12.83□□□□□ -0.36
UFD1-202ENST00000399523 CADM3Q8N126 398 aa12.83□□□□□ -0.36
UFD1-202ENST00000399523 OR51B2Q9Y5P1 312 aa12.83□□□□□ -0.36
UFD1-202ENST00000399523 MARCH11A6NNE9 402 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 PTGES3LE9PB15 166 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 SSX5O60225 188 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 GNG7O60262 68 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 FCGR2CP31995 323 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 ERVK-16P61578 105 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 PACRGLQ8N7B6 248 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 TMEM56Q96MV1 263 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 TMEM231Q9H6L2 316 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 RNF167Q9H6Y7 350 aa12.82□□□□□ -0.36
UFD1-202ENST00000399523 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms