RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PRR7Q8TB68 274 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 ORAOV1Q8WV07 137 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 CLEC7AQ9BXN2 247 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 HLA-DQA1P01909 254 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 PRR20EP86478 221 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 PRR20CP86479 221 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 PRR20DP86480 221 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 PRR20BP86481 221 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 PRR20AP86496 221 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 LEMD1Q68G75 181 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 C1orf229Q6ZS94 237 aaPredicted RBP11.49□□□□□ -0.57
APOB-202ENST00000399256 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 NABP2Q9BQ15 211 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 CXXC4Q9H2H0 198 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 PLEKHA3Q9HB20 300 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 CDX4O14627 284 aaPredicted RBP11.49□□□□□ -0.57
APOB-202ENST00000399256 AGFG2O95081 481 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 TNFSF15O95150 251 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 MEOX1P50221 254 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 FAM168AQ92567 244 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 ENY2Q9NPA8 101 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 COL27A1Q8IZC6 1860 aaPredicted RBP11.49□□□□□ -0.57
APOB-202ENST00000399256 C15orf61A6NNL5 157 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 ZNF891A8MT65 544 aaPredicted RBP11.49□□□□□ -0.57
APOB-202ENST00000399256 J3QW42 95 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 IGLV2-8P01709 118 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 ACP1P24666 158 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 SMIM21Q3B7S5 101 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 PRR31Q5SQ13 230 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 FAM214BQ7L5A3 538 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 TMEM167BQ9NRX6 74 aa11.49□□□□□ -0.57
APOB-202ENST00000399256 AHCTF1Q8WYP5 2266 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 TRGV8A0A0C4DH27 118 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 TIMM8AO60220 97 aaPredicted RBP11.48□□□□□ -0.57
APOB-202ENST00000399256 IGHV1-2P23083 117 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 ARG2P78540 354 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 C18orf32Q8TCD1 76 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 ISLRO14498 428 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 FABP6P51161 128 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 RBX1P62877 108 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 TNXAQ16473 311 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 Q56UQ5 140 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 LRRC29Q8WV35 223 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 IFI27L2Q9H2X8 130 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
APOB-202ENST00000399256 DUSP13Q9UII6 198 aa11.48□□□□□ -0.57
APOB-202ENST00000399256 NKX6-3A6NJ46 265 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 CD59P13987 128 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 COX19Q49B96 90 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 SLC25A10Q9UBX3 287 aaPredicted RBP11.47□□□□□ -0.57
APOB-202ENST00000399256 PRDX2P32119 198 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 OR4A47Q6IF82 309 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 FAM90A1Q86YD7 464 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 BET1LQ9NYM9 111 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 TECRQ9NZ01 308 aaKnown RBP11.47□□□□□ -0.57
APOB-202ENST00000399256 ABI3Q9P2A4 366 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 COX11Q9Y6N1 276 aa11.47□□□□□ -0.57
APOB-202ENST00000399256 KLF3P57682 345 aaPredicted RBP11.46□□□□□ -0.57
APOB-202ENST00000399256 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 TP73-AS1Q9UF72 201 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 PRR14LQ5THK1 2151 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 HSBP1O75506 76 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 REG1AP05451 166 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 UBE2V1Q13404 147 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 NEUROG1Q92886 237 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 JPT1Q9UK76 154 aa11.46□□□□□ -0.57
APOB-202ENST00000399256 IGKV1OR2-108A0A075B7D4 117 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 M0R2Z0 102 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.58
APOB-202ENST00000399256 HSPE1P61604 102 aaKnown RBP11.46□□□□□ -0.58
APOB-202ENST00000399256 EBLN2Q6P2I7 272 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 ERASQ7Z444 233 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 ZNF738Q8NE65 137 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 OR4S2Q8NH73 311 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 C22orf15Q8WYQ4 148 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 SPRR3Q9UBC9 169 aa11.46□□□□□ -0.58
APOB-202ENST00000399256 PPOXP50336 477 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 SELENOVP59797 346 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 TCF15Q12870 199 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 MLANAQ16655 118 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 RNASEKQ6P5S7 137 aaKnown RBP11.45□□□□□ -0.58
APOB-202ENST00000399256 TRAT1Q6PIZ9 186 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 MRPS16Q9Y3D3 137 aaKnown RBP11.45□□□□□ -0.58
APOB-202ENST00000399256 IGHV2-26A0A0B4J1V2 119 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 FAM181BA6NEQ2 426 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 MFAP2P55001 183 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 LOXL3P58215 753 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 ANKRD39Q53RE8 183 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 GDF5OSQ5U4N7 250 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 SPACA3Q8IXA5 215 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 SSBP4Q9BWG4 385 aaPredicted RBP11.45□□□□□ -0.58
APOB-202ENST00000399256 ZNF355PQ9NSJ1 428 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
APOB-202ENST00000399256 IGLL1P15814 213 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms