RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 HSPE1P61604 102 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 BAK1Q16611 211 aa10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 EEF1AKMT3Q96AZ1 226 aa10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ELOVL1Q9BW60 279 aa10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ZC4H2Q9NQZ6 224 aa10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 PRR13Q9NZ81 148 aa10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ZMAT5Q9UDW3 170 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ZNF256Q9Y2P7 627 aaPredicted RBP10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 F11RQ9Y624 299 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB1-202ENST00000399079 B3GALNT1O75752 331 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 LY86O95711 162 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 CLEC3BP05452 202 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SPNP16150 400 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 AKR1C4P17516 323 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 FAUP35544 74 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 PRCDQ00LT1 54 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 Q6ZRM9 215 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 RRNAD1Q96FB5 475 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 THYN1Q9P016 225 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SORL1Q92673 2214 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ST8SIA3O43173 380 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 GGCTO75223 188 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ATG12O94817 140 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ARL3P36405 182 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 TATDN3Q17R31 274 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ZNF57Q68EA5 555 aaPredicted RBP10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SGPP2Q8IWX5 399 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SELENOHQ8IZQ5 122 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 RNASE11Q8TAA1 199 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ZNF502Q8TBZ5 544 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 RBPMSQ93062 196 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 CXorf58Q96LI9 332 aa10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SDHCQ99643 169 aaPredicted RBP10.74□□□□□ -0.69
HLA-DQB1-202ENST00000399079 TRBV7-1A0A0A6YYK4 115 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 IGLV1-51P01701 117 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 CSN3P07498 182 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 EDN2P20800 178 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 GPR183P32249 361 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SUPT4H1P63272 117 aaKnown RBP10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 DHODHQ02127 395 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 TMEM268Q5VZI3 342 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 OR2C3Q8N628 320 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 GALNT14Q96FL9 552 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SCGB3A2Q96PL1 93 aa10.73□□□□□ -0.69
HLA-DQB1-202ENST00000399079 IGHV3-35A0A0C4DH35 117 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 CYB5BO43169 146 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 IFNA17P01571 189 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 TMEM187Q14656 261 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 FAM209BQ5JX69 171 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 TMED4Q7Z7H5 227 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 OR1P1Q8NH06 330 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SCARB1Q8WTV0 552 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 PLEKHA3Q9HB20 300 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 KCNIP3Q9Y2W7 256 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 LSM4Q9Y4Z0 139 aaKnown RBP10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 TMEM56-RWDD3S4R434 201 aa10.72□□□□□ -0.69
HLA-DQB1-202ENST00000399079 LINC00854A0A1B0GVQ3 168 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 OR2T8A6NH00 312 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 K7EIM0 57 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 CCR6P51684 374 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 TRIQKQ629K1 86 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 GPHB5Q86YW7 130 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 SLC35G3Q8N808 338 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 VN1R17PQ8TDU5 208 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 GPR146Q96CH1 333 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 PEMTQ9UBM1 199 aa10.71□□□□□ -0.69
HLA-DQB1-202ENST00000399079 ZNF320A2RRD8 509 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 F8W735 103 aaPredicted RBP10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 IGHV3-48P01763 117 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 GP9P14770 177 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 ERHP84090 104 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 PLET1Q6UQ28 207 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 FAM219AQ8IW50 185 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 UBAC2Q8NBM4 344 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 ZNF114Q8NC26 417 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 DEDD2Q8WXF8 326 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 MISP3Q96FF7 219 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 PDCD10Q9BUL8 212 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 CACNG5Q9UF02 275 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 COL7A1Q02388 2944 aa10.7□□□□□ -0.7
HLA-DQB1-202ENST00000399079 IZUMO1RA6ND01 250 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 NXPH3O95157 252 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 INPP1P49441 399 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 UNQ9165/PRO28630Q6UXU0 137 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 LYZL2Q7Z4W2 148 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 OR1L6Q8NGR2 347 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 CACNG8Q8WXS5 425 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 PINX1Q96BK5 328 aaKnown RBP10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 CHRDL1Q9BU40 450 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 C21orf62Q9NYP8 219 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 SIGLEC8Q9NYZ4 499 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 SELENOKQ9Y6D0 94 aa10.69□□□□□ -0.7
HLA-DQB1-202ENST00000399079 C2orf70A6NJV1 201 aa10.68□□□□□ -0.7
HLA-DQB1-202ENST00000399079 I3L2K1 104 aa10.68□□□□□ -0.7
HLA-DQB1-202ENST00000399079 LGALS9O00182 355 aa10.68□□□□□ -0.7
HLA-DQB1-202ENST00000399079 TGOLN2O43493 480 aa10.68□□□□□ -0.7
HLA-DQB1-202ENST00000399079 FOLR2P14207 255 aa10.68□□□□□ -0.7
HLA-DQB1-202ENST00000399079 SNCAP37840 140 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms