RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TGFBR3Q03167 851 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 DEFB125Q8N687 156 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 LMX1AQ8TE12 382 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 NPIPB3Q92617 1050 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM133Q9H2Q1 129 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 IFI27L2Q9H2X8 130 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 TEX48A0A1B0GUV7 120 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 AGFG2O95081 481 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 GABRG2P18507 467 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 AADACP22760 399 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 UBE2NP61088 152 aaKnown RBP5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 CD164Q04900 197 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 SLC25A47Q6Q0C1 308 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 C9orf40Q8IXQ3 194 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 TEX29Q8N6K0 151 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 OR51E1Q8TCB6 317 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 ADAT3Q96EY9 351 aaPredicted RBP5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 FAM173AQ9BQD7 235 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 MLST8Q9BVC4 326 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 GGTLC1Q9BX51 225 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 FOXQ1Q9C009 403 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 OR10A2Q9H208 303 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 EHFQ9NZC4 300 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 INSIG2Q9Y5U4 225 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 CSMD2Q7Z408 3487 aa5.5□□□□□ -1.53
TM9SF4-202ENST00000398022 IGHG1P01857 330 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 DANCRP0C864 163 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 HOXB4P17483 251 aaPredicted RBP5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 RBM11P57052 281 aaKnown RBP5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 KIAA1644Q3SXP7 199 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 MEIG1Q5JSS6 88 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 AADACL3Q5VUY0 350 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 PAQR4Q8N4S7 273 aaPredicted RBP5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 RNF126Q9BV68 326 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 IGKV3D-11A0A0A0MRZ8 115 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 IGHV5-51A0A0C4DH38 117 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 LMX1BO60663 402 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 IGHV4-34P06331 123 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 LINC00694P0DN24 101 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 IGLC2P0DOY2 106 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 IGLC3P0DOY3 106 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 GCSHP23434 173 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 SRP14P37108 136 aaKnown RBP5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 GFERP55789 205 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 RTP5Q14D33 572 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 ELOBQ15370 118 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 LINC01559Q495D7 138 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 FAM231DQ6ZW35 169 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 SGPP2Q8IWX5 399 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 WDR31Q8NA23 367 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 OR4C12Q96R67 309 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 RNASE7Q9H1E1 156 aaKnown RBP5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 C5orf66Q9H5L9 145 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 RALGAPA1Q6GYQ0 2036 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM131Q92545 1883 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 CFAP46Q8IYW2 2715 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 TRAV24A0A0B4J272 114 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 K7EP34 96 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 CD5LO43866 347 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 ZNF354AO60765 605 aaPredicted RBP5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 HLA-DOBP13765 273 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 TSPOP30536 169 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 QRFPP83859 136 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 ZNF524Q96C55 264 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 CYTL1Q9NRR1 136 aa5.49□□□□□ -1.53
TM9SF4-202ENST00000398022 A0A1B0GV50 99 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 CEACAM18A8MTB9 384 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 FNDC10F2Z333 226 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 SYNGR1O43759 233 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 NHLRC4P0CG21 123 aaPredicted RBP5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 ZNF92Q03936 586 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 MYBPHQ13203 477 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 PLA2G2CQ5R387 149 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 LYPD6Q86Y78 171 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 ZNF709Q8N972 641 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 OR4A5Q8NH83 315 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 SLC25A40Q8TBP6 338 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM171Q8WVE6 324 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 AP1S3Q96PC3 154 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 IMMP2LQ96T52 175 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 PARP11Q9NR21 331 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 COL12A1Q99715 3063 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 SPTA1P02549 2419 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 COL5A1P20908 1838 aaPredicted RBP5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 A6NDN8 102 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 SH2D1BO14796 132 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 REG1AP05451 166 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 PGA4P0DJD7 388 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 PGA5P0DJD9 388 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 PI3P19957 117 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 CFHR1Q03591 330 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 TESK1Q15569 626 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 Q6ZRG5 221 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 ARHGAP5-AS1Q96IT6 56 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 SPACA5Q96QH8 159 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 LOC107984640A0A0U1RRK4 108 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 H0YIZ8 118 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 H0YJW9 148 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 SOCS1O15524 211 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms