RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 OR5R1Q8NH85 324 aa21.75■■□□□ 1.07
CPNE1-203ENST00000397442 SSMEM1Q8WWF3 244 aa21.75■■□□□ 1.07
CPNE1-203ENST00000397442 ARPC1AQ92747 370 aa21.75■■□□□ 1.07
CPNE1-203ENST00000397442 FAM103A1Q9BTL3 118 aaKnown RBP21.75■■□□□ 1.07
CPNE1-203ENST00000397442 FBXO7Q9Y3I1 522 aa21.75■■□□□ 1.07
CPNE1-203ENST00000397442 SH2D7A6NKC9 451 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-203ENST00000397442 OR8G2PQ6IF36 304 aa21.75■■□□□ 1.07
CPNE1-203ENST00000397442 SRSF8Q9BRL6 282 aaKnown RBP21.75■■□□□ 1.07
CPNE1-203ENST00000397442 SETXQ7Z333 2677 aaKnown RBP21.74■■□□□ 1.07
CPNE1-203ENST00000397442 PRSS46E5RG02 174 aa21.74■■□□□ 1.07
CPNE1-203ENST00000397442 REG1AP05451 166 aa21.74■■□□□ 1.07
CPNE1-203ENST00000397442 EGR2P11161 476 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-203ENST00000397442 C2orf83Q53S99 150 aa21.74■■□□□ 1.07
CPNE1-203ENST00000397442 C16orf82Q7Z2V1 217 aa21.74■■□□□ 1.07
CPNE1-203ENST00000397442 GON7Q9BXV9 100 aa21.74■■□□□ 1.07
CPNE1-203ENST00000397442 ANK3Q12955 4377 aaKnown RBP21.73■■□□□ 1.07
CPNE1-203ENST00000397442 CD99P14209 185 aa21.73■■□□□ 1.07
CPNE1-203ENST00000397442 SNCAP37840 140 aa21.73■■□□□ 1.07
CPNE1-203ENST00000397442 CLINT1Q14677 625 aa21.73■■□□□ 1.07
CPNE1-203ENST00000397442 RPL7L1Q6DKI1 246 aaKnown RBP21.73■■□□□ 1.07
CPNE1-203ENST00000397442 SLC51BQ86UW2 128 aa21.73■■□□□ 1.07
CPNE1-203ENST00000397442 OR1S2Q8NGQ3 325 aa21.73■■□□□ 1.07
CPNE1-203ENST00000397442 ZNF471Q9BX82 626 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-203ENST00000397442 OR8U8P0C7N1 319 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 FOSL1P15407 271 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 HNF1AP20823 631 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 ATP5IP56385 69 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-203ENST00000397442 ASPHD1Q5U4P2 390 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 HSD17B13Q7Z5P4 300 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-203ENST00000397442 SIGLECL1Q8N7X8 197 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 P2RX4Q99571 388 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 HIVEP1P15822 2718 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 HOXA3O43365 443 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-203ENST00000397442 HBG1P69891 147 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 HBG2P69892 147 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 ETV3LQ6ZN32 361 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 MRPL41Q8IXM3 137 aaKnown RBP21.72■■□□□ 1.07
CPNE1-203ENST00000397442 ZNF114Q8NC26 417 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 OR10P1Q8NGE3 313 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 VPREB3Q9UKI3 123 aa21.72■■□□□ 1.07
CPNE1-203ENST00000397442 LINC01548A6NM66 108 aa21.71■■□□□ 1.07
CPNE1-203ENST00000397442 M0QZK8 103 aa21.71■■□□□ 1.07
CPNE1-203ENST00000397442 RAB11AP62491 216 aa21.71■■□□□ 1.07
CPNE1-203ENST00000397442 SLC38A11Q08AI6 406 aa21.71■■□□□ 1.07
CPNE1-203ENST00000397442 C19orf35Q6ZS72 473 aa21.71■■□□□ 1.07
CPNE1-203ENST00000397442 CYSRT1A8MQ03 144 aa21.7■■□□□ 1.06
CPNE1-203ENST00000397442 CFDP00746 253 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-203ENST00000397442 STOML3Q8TAV4 291 aa21.7■■□□□ 1.06
CPNE1-203ENST00000397442 TNFRSF19Q9NS68 423 aa21.7■■□□□ 1.06
CPNE1-203ENST00000397442 BTBD17A6NE02 478 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 IFNA4P05014 189 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 MFAP2P55001 183 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 PVRIGQ6DKI7 326 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 ABHD5Q8WTS1 349 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 ATP5SQ99766 215 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 SLA2Q9H6Q3 261 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 ATP6V0E1O15342 81 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 ST8SIA2Q92186 375 aa21.69■■□□□ 1.06
CPNE1-203ENST00000397442 PINX1Q96BK5 328 aaKnown RBP21.69■■□□□ 1.06
CPNE1-203ENST00000397442 JTBO76095 146 aa21.68■■□□□ 1.06
CPNE1-203ENST00000397442 CTRB1P17538 263 aa21.68■■□□□ 1.06
CPNE1-203ENST00000397442 BLCAPP62952 87 aa21.68■■□□□ 1.06
CPNE1-203ENST00000397442 CTRB2Q6GPI1 263 aa21.68■■□□□ 1.06
CPNE1-203ENST00000397442 UBAC2Q8NBM4 344 aa21.68■■□□□ 1.06
CPNE1-203ENST00000397442 SGMS2Q8NHU3 365 aa21.68■■□□□ 1.06
CPNE1-203ENST00000397442 PARP11Q9NR21 331 aa21.68■■□□□ 1.06
CPNE1-203ENST00000397442 DMRT1Q9Y5R6 373 aa21.68■■□□□ 1.06
CPNE1-203ENST00000397442 SCAF4O95104 1147 aaKnown RBP21.67■■□□□ 1.06
CPNE1-203ENST00000397442 TEX261Q6UWH6 196 aa21.67■■□□□ 1.06
CPNE1-203ENST00000397442 LILRB2Q8N423 598 aa21.67■■□□□ 1.06
CPNE1-203ENST00000397442 LFNGQ8NES3 379 aa21.67■■□□□ 1.06
CPNE1-203ENST00000397442 F11RQ9Y624 299 aaKnown RBP21.67■■□□□ 1.06
CPNE1-203ENST00000397442 HIVEP2P31629 2446 aa21.67■■□□□ 1.06
CPNE1-203ENST00000397442 SUB1P53999 127 aaKnown RBP eCLIP21.66■■□□□ 1.061e-12■■■■□ 22.8
CPNE1-203ENST00000397442 UBA52P62987 128 aaKnown RBP21.66■■□□□ 1.06
CPNE1-203ENST00000397442 VWC2Q2TAL6 325 aa21.66■■□□□ 1.06
CPNE1-203ENST00000397442 Q6ZS46 218 aa21.66■■□□□ 1.06
CPNE1-203ENST00000397442 OR1P1Q8NH06 330 aa21.66■■□□□ 1.06
CPNE1-203ENST00000397442 ARV1Q9H2C2 271 aa21.66■■□□□ 1.06
CPNE1-203ENST00000397442 DFFBO76075 338 aa21.66■■□□□ 1.06
CPNE1-203ENST00000397442 CRYGCP07315 174 aa21.66■■□□□ 1.06
CPNE1-203ENST00000397442 ZNF266Q14584 549 aa21.66■■□□□ 1.06
CPNE1-203ENST00000397442 ATP6V1FQ16864 119 aa21.66■■□□□ 1.06
CPNE1-203ENST00000397442 NPIPB5A8MRT5 1133 aa21.65■■□□□ 1.06
CPNE1-203ENST00000397442 IGHG2P01859 326 aa21.65■■□□□ 1.06
CPNE1-203ENST00000397442 TPT1P13693 172 aaKnown RBP21.65■■□□□ 1.06
CPNE1-203ENST00000397442 BAP18Q8IXM2 172 aa21.65■■□□□ 1.06
CPNE1-203ENST00000397442 TTC9CQ8N5M4 171 aa21.65■■□□□ 1.06
CPNE1-203ENST00000397442 MTORP42345 2549 aa21.64■■□□□ 1.06
CPNE1-203ENST00000397442 BORCS7-ASMTA0A0B4J1R7 106 aa21.64■■□□□ 1.05
CPNE1-203ENST00000397442 DLK1P80370 383 aa21.64■■□□□ 1.05
CPNE1-203ENST00000397442 TMEM147Q9BVK8 224 aa21.64■■□□□ 1.05
CPNE1-203ENST00000397442 WNT10AQ9GZT5 417 aa21.64■■□□□ 1.05
CPNE1-203ENST00000397442 GSX1Q9H4S2 264 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-203ENST00000397442 FBXO24O75426 580 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 CRIP2P52943 208 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-203ENST00000397442 C9orf152Q5JTZ5 239 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 TMEM86BQ8N661 226 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 ZNF680Q8NEM1 530 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 RNASEH2CQ8TDP1 164 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms