RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CAV2P51636 162 aa13.37□□□□□ -0.27
TSPAN4-205ENST00000397406 SPANXN5Q5MJ07 72 aa13.37□□□□□ -0.27
TSPAN4-205ENST00000397406 ACOT7LQ6ZUV0 252 aa13.37□□□□□ -0.27
TSPAN4-205ENST00000397406 TMEM252Q8N6L7 170 aa13.37□□□□□ -0.27
TSPAN4-205ENST00000397406 INO80EQ8NBZ0 244 aaPredicted RBP13.37□□□□□ -0.27
TSPAN4-205ENST00000397406 OR4C12Q96R67 309 aa13.37□□□□□ -0.27
TSPAN4-205ENST00000397406 SRSF8Q9BRL6 282 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-205ENST00000397406 MFFQ9GZY8 342 aa13.37□□□□□ -0.27
TSPAN4-205ENST00000397406 EGR2P11161 476 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-205ENST00000397406 ZNF345Q14585 488 aa13.36□□□□□ -0.27
TSPAN4-205ENST00000397406 BSXQ3C1V8 233 aa13.36□□□□□ -0.27
TSPAN4-205ENST00000397406 TMEM14EPQ6UXP3 125 aa13.36□□□□□ -0.27
TSPAN4-205ENST00000397406 RBMS3Q6XE24 437 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-205ENST00000397406 TMEM170AQ8WVE7 144 aa13.36□□□□□ -0.27
TSPAN4-205ENST00000397406 FAM103A1Q9BTL3 118 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-205ENST00000397406 DNAJC9-AS1A6NH13 148 aa13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 C15orf62A8K5M9 175 aa13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 OR13C7P0DN81 318 aa13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 AREGP15514 252 aa13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 NUP62P37198 522 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 BLCAPP62952 87 aa13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 EWSR1Q01844 656 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■■■■□ 25
TSPAN4-205ENST00000397406 OR2F1Q13607 317 aa13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 ZNF418Q8TF45 676 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 SLC25A31Q9H0C2 315 aa13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 STRAPQ9Y3F4 350 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 U3KQ87 197 aa13.35□□□□□ -0.27
TSPAN4-205ENST00000397406 LINC01548A6NM66 108 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 ATP6V0E1O15342 81 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 IFNA10P01566 189 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 APELAP0DMC3 54 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 RNASE2P10153 161 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 HTR2BP41595 481 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 AP2S1P53680 142 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 ERHP84090 104 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 NHLH2Q02577 135 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 TMEM267Q0VDI3 215 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 ASPHD1Q5U4P2 390 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 HSD17B13Q7Z5P4 300 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 MRPL41Q8IXM3 137 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 KCNRGQ8N5I3 272 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 SLC24A4Q8NFF2 622 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 SGMS2Q8NHU3 365 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 BSCL2Q96G97 398 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 DUX5Q96PT3 197 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
TSPAN4-205ENST00000397406 A0A0D9SG52 128 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 TMEM89A2RUT3 159 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 PMS2P5A8MQ11 134 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 IGHG2P01859 326 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 REG1AP05451 166 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 METTL15P1P0C7V9 234 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 NPY1RP25929 384 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 CRIP2P52943 208 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 RPP30P78346 268 aaKnown RBP13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 C2orf83Q53S99 150 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 Q6ZS46 218 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 HAPLN4Q86UW8 402 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 ZNF114Q8NC26 417 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 ABHD5Q8WTS1 349 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 P2RX4Q99571 388 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 PARP11Q9NR21 331 aa13.33□□□□□ -0.28
TSPAN4-205ENST00000397406 CLDN34H7C241 214 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 CST7O76096 145 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 CTRB1P17538 263 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 SNCAP37840 140 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 SULT1A1P50225 295 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 BAXQ07812 192 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 ARL16Q0P5N6 197 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 C9orf152Q5JTZ5 239 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 CTRB2Q6GPI1 263 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 TMUB2Q71RG4 321 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 BOLA1Q9Y3E2 137 aa13.32□□□□□ -0.28
TSPAN4-205ENST00000397406 S100A11P31949 105 aa13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 ATP5IP56385 69 aaPredicted RBP13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 UBA52P62987 128 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 PVRIGQ6DKI7 326 aa13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 SLC35E3Q7Z769 313 aa13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 STX12Q86Y82 276 aa13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 STPG2Q8N412 459 aa13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 LFNGQ8NES3 379 aa13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 TAF15Q92804 592 aaKnown RBP eCLIP13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 ARL6Q9H0F7 186 aa13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 ZC4H2Q9NQZ6 224 aa13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 PAIP2BQ9ULR5 123 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-205ENST00000397406 NPIPB5A8MRT5 1133 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 PRSS46E5RG02 174 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 IGF1P05019 195 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 CRYGCP07315 174 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 OR8U8P0C7N1 319 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 C19orf54Q5BKX5 351 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 C19orf35Q6ZS72 473 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 TTC9CQ8N5M4 171 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 FBXL17Q9UF56 701 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 F11RQ9Y624 299 aaKnown RBP13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 FBXO24O75426 580 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 SUB1P53999 127 aaKnown RBP eCLIP13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 MFAP2P55001 183 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 RAB11AP62491 216 aa13.3□□□□□ -0.28
TSPAN4-205ENST00000397406 AKIRIN2Q53H80 203 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms