RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 MPDU1O75352 247 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 OR13C7P0DN81 318 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 GPX4P36969 197 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 IER3P46695 156 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 GNB1P62873 340 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 CX3CL1P78423 397 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 DLK1P80370 383 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 TMEM267Q0VDI3 215 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 VWC2Q2TAL6 325 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 TUSC1Q2TAM9 212 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 DEFB112Q30KQ8 113 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 SPINK9Q5DT21 86 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 ETFRF1Q6IPR1 90 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 TMEM217Q8N7C4 229 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 LRRC20Q8TCA0 184 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 ARV1Q9H2C2 271 aa15.12■□□□□ 0.01
TSPAN4-204ENST00000397404 NPIPB5A8MRT5 1133 aa15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 TEX22C9J3V5 150 aa15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 SRP14P37108 136 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 WT1-ASQ06250 92 aa15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 KRTAP1-1Q07627 177 aa15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 EXOSC2Q13868 293 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 PVRIGQ6DKI7 326 aa15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 UQCC1Q9NVA1 299 aa15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 UBQLN2Q9UHD9 624 aa15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 ZNF580Q9UK33 172 aa15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 PAIP2BQ9ULR5 123 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-204ENST00000397404 CGB1A6NKQ9 187 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 FCN1O00602 326 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 OPN1MWP04001 364 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 OPN1MW2P0DN77 364 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 OPN1MW3P0DN78 364 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 RNASE2P10153 161 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 PAX6P26367 422 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 OR8G2PQ6IF36 304 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 ZNF680Q8NEM1 530 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 SCARB1Q8WTV0 552 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 GINS3Q9BRX5 216 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 SVEP1Q4LDE5 3571 aa15.1■□□□□ 0.01
TSPAN4-204ENST00000397404 IGHV7-81A0A0B4J1V7 117 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 RPS10-NUDT3A0A1W2PQS6 291 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 CRYGCP07315 174 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 SEC11BP0C7V7 166 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 CRIP2P52943 208 aaPredicted RBP15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 SSBP2P81877 361 aaPredicted RBP15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 CLINT1Q14677 625 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 RPL7L1Q6DKI1 246 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 SLC25A24Q6NUK1 477 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 OR10W1Q8NGF6 305 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 SGMS2Q8NHU3 365 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 SCGB1C1Q8TD33 95 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 VPREB3Q9UKI3 123 aa15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 F11RQ9Y624 299 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-204ENST00000397404 ZNF469Q96JG9 3925 aaPredicted RBP15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 PRSS46E5RG02 174 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 E7EUB6 86 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 MYOD1P15172 320 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 IFITM2Q01629 132 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 AKIRIN2Q53H80 203 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 C10orf55Q5SWW7 151 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 RBMS3Q6XE24 437 aaKnown RBP15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 TTC9CQ8N5M4 171 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 ABHD5Q8WTS1 349 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 SMIM3Q9BZL3 60 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 NPVFQ9HCQ7 196 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 YAE1D1Q9NRH1 226 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 KCNIP2Q9NS61 270 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 THYN1Q9P016 225 aa15.08■□□□□ 0.01
TSPAN4-204ENST00000397404 HIST1H1BP16401 226 aaKnown RBP15.08■□□□□ 0
TSPAN4-204ENST00000397404 CTRB1P17538 263 aa15.08■□□□□ 0
TSPAN4-204ENST00000397404 RAB5CP51148 216 aa15.08■□□□□ 0
TSPAN4-204ENST00000397404 CTRB2Q6GPI1 263 aa15.08■□□□□ 0
TSPAN4-204ENST00000397404 P2RX4Q99571 388 aa15.08■□□□□ 0
TSPAN4-204ENST00000397404 PSMG3Q9BT73 122 aaPredicted RBP15.08■□□□□ 0
TSPAN4-204ENST00000397404 CDC42EP3Q9UKI2 254 aa15.08■□□□□ 0
TSPAN4-204ENST00000397404 TIMM9Q9Y5J7 89 aa15.08■□□□□ 0
TSPAN4-204ENST00000397404 A0A1B0GW64 132 aa15.07■□□□□ 0
TSPAN4-204ENST00000397404 RAB14P61106 215 aa15.07■□□□□ 0
TSPAN4-204ENST00000397404 RAB31Q13636 194 aa15.07■□□□□ 0
TSPAN4-204ENST00000397404 KLK9Q2XQG4 91 aa15.07■□□□□ 0
TSPAN4-204ENST00000397404 HAPLN4Q86UW8 402 aa15.07■□□□□ 0
TSPAN4-204ENST00000397404 C22orf15Q8WYQ4 148 aa15.07■□□□□ 0
TSPAN4-204ENST00000397404 KLK9Q9UKQ9 250 aa15.07■□□□□ 0
TSPAN4-204ENST00000397404 UMAD1C9J7I0 102 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 C17orf112F2Z3M2 114 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 IGF1P05019 195 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 DEFA4P12838 97 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 SERF2P84101 59 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 CD69Q07108 199 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 TMEM170AQ8WVE7 144 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 WDR61Q9GZS3 305 aaKnown RBP15.06■□□□□ 0
TSPAN4-204ENST00000397404 SLC25A32Q9H2D1 315 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 WFDC1Q9HC57 220 aa15.06■□□□□ 0
TSPAN4-204ENST00000397404 FLNBO75369 2602 aaKnown RBP15.05■□□□□ 0
TSPAN4-204ENST00000397404 BRI3O95415 125 aa15.05■□□□□ -0
TSPAN4-204ENST00000397404 IGHG2P01859 326 aa15.05■□□□□ -0
TSPAN4-204ENST00000397404 SPP1P10451 314 aa15.05■□□□□ -0
TSPAN4-204ENST00000397404 RPL15P61313 204 aaKnown RBP15.05■□□□□ -0
TSPAN4-204ENST00000397404 ARL16Q0P5N6 197 aa15.05■□□□□ -0
TSPAN4-204ENST00000397404 BCL6BQ8N143 479 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms