RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PITX3O75364 302 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 MED6O75586 246 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 IFNA17P01571 189 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 IGLV2-23P01705 113 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 HNRNPCP07910 306 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■□□□□ 8.9
NEDD8-202ENST00000396828 FGF2P09038 288 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 OR9G9P0C7N8 305 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 PVALBP20472 110 aaPredicted RBP8.03□□□□□ -1.12
NEDD8-202ENST00000396828 CDX1P47902 265 aaPredicted RBP8.03□□□□□ -1.12
NEDD8-202ENST00000396828 IL15RAQ13261 267 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 KIAA0141Q14154 515 aaPredicted RBP8.03□□□□□ -1.12
NEDD8-202ENST00000396828 PSG5Q15238 335 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 IZUMO4Q1ZYL8 232 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 ASPHD1Q5U4P2 390 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 Q6ZRM9 215 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 ZNF429Q86V71 674 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 PUSL1Q8N0Z8 303 aaKnown RBP8.03□□□□□ -1.12
NEDD8-202ENST00000396828 FAM71E2Q8N5Q1 922 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 RNF152Q8N8N0 203 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 NPBQ8NG41 125 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 TMEM167AQ8TBQ9 72 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 GPR61Q9BZJ8 451 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 COMMD5Q9GZQ3 224 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 KLK15Q9H2R5 256 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 METTL1Q9UBP6 276 aaKnown RBP8.03□□□□□ -1.12
NEDD8-202ENST00000396828 LSM5Q9Y4Y9 91 aaKnown RBP8.03□□□□□ -1.12
NEDD8-202ENST00000396828 RYR2Q92736 4967 aa8.02□□□□□ -1.12
NEDD8-202ENST00000396828 C15orf61A6NNL5 157 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 RRHO14718 337 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 ACTL6BO94805 426 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 NXPH3O95157 252 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 MPC2O95563 127 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 MBPP02686 304 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-202ENST00000396828 C1QBP02746 253 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 IL6RP08887 468 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-202ENST00000396828 CNTFRP26992 372 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 MAS1LP35410 378 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 OR2B8PP59922 312 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 RPL8P62917 257 aaKnown RBP8.02□□□□□ -1.13
NEDD8-202ENST00000396828 ID3Q02535 119 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 FOXE3Q13461 319 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 RAB32Q13637 225 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 CXorf66Q5JRM2 361 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-202ENST00000396828 PPP1R27Q86WC6 154 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 MMD2Q8IY49 270 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 OR52E5Q8NH55 327 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 HYLS1Q96M11 299 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 CLCC1Q96S66 551 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 GNB4Q9HAV0 340 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 TMEM14BQ9NUH8 114 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 HSPB7Q9UBY9 170 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 FOXA2Q9Y261 457 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-202ENST00000396828 ZNF257Q9Y2Q1 563 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 NSG2Q9Y328 171 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 U3KQK5 164 aa8.02□□□□□ -1.13
NEDD8-202ENST00000396828 TRAV3A0A0B4J244 114 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 CEBPZOSA8MTT3 80 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 SEC14L6B5MCN3 397 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 G3V318 75 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 SMLR1H3BR10 107 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 K7EPK0 472 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 L7N2F9 121 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 SYNGR2O43760 224 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 NDUFA3O95167 84 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 LY86O95711 162 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 IGHG4P01861 327 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 CRYGBP07316 175 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 PSMB8P28062 276 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 NUP62P37198 522 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-202ENST00000396828 SPCS3P61009 180 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 VAMP2P63027 116 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 TNFRSF9Q07011 255 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 CD300CQ08708 224 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 FHL3Q13643 280 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 PRSS8Q16651 343 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 AARDQ4LEZ3 155 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 PRSS54Q6PEW0 395 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 OR11H1Q8NG94 326 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 OR5B3Q8NH48 314 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 WDR89Q96FK6 387 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-202ENST00000396828 RASL11BQ9BPW5 248 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 QTRT1Q9BXR0 403 aaKnown RBP8.01□□□□□ -1.13
NEDD8-202ENST00000396828 FBXL15Q9H469 300 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 ZNF430Q9H8G1 570 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-202ENST00000396828 ENY2Q9NPA8 101 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 OR51B2Q9Y5P1 312 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 WSB1Q9Y6I7 421 aa8.01□□□□□ -1.13
NEDD8-202ENST00000396828 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 FXYD6-FXYD2A0A087WZ82 144 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 TRAV14DV4A0A0A6YYC5 116 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 E5RGE8 158 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 SSSCA1O60232 199 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 DEDDO75618 318 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 IGF1P05019 195 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 ELANEP08246 267 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 SLC25A4P12235 298 aa8□□□□□ -1.13
NEDD8-202ENST00000396828 PPIFP30405 207 aaKnown RBP8□□□□□ -1.13
NEDD8-202ENST00000396828 HSPE1P61604 102 aaKnown RBP8□□□□□ -1.13
NEDD8-202ENST00000396828 POLR2GP62487 172 aaKnown RBP eCLIP8□□□□□ -1.13
NEDD8-202ENST00000396828 GNB1P62873 340 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms