RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 SSBP2P81877 361 aaPredicted RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 ZNF658BQ4V348 819 aaPredicted RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 PEAR1Q5VY43 1037 aaPredicted RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 OR10W1Q8NGF6 305 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 TRGV2A0A075B6R0 118 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 ODAMA1E959 279 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 NAPSAO96009 420 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 OCIAD2Q56VL3 154 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 DEFB124Q8NES8 71 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 NANOS3P60323 173 aaKnown RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 GPBAR1Q8TDU6 330 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 CLEC7AQ9BXN2 247 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 TCF20Q9UGU0 1960 aaKnown RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 TRAV9-1A0A075B6T8 112 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 TOMM40O96008 361 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 VWC2LB2RUY7 222 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 SPINT1O43278 529 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 CCL3P10147 92 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 ADAMTSL3P82987 1691 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 GATD1Q8NB37 220 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 SFXN3Q9BWM7 321 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 A0A1W2PRS3 328 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 SEC11AP67812 179 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 RSPO2Q6UXX9 243 aaPredicted RBP8.82□□□□□ -1
COL4A4-201ENST00000396625 LEAP2Q969E1 77 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 ZNF479Q96JC4 524 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 HBDP02042 147 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 TMEM91Q6ZNR0 172 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 RFLNBQ8N5W9 214 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 FER1L6-AS1Q8NA97 138 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 CCL19Q99731 98 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 IGHV3OR16-13A0A075B7E8 117 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 A0A087WWC5 75 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 IGHV3-74A0A0B4J1X5 117 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 LINC01587Q99440 93 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 TRAV9-2A0A087WT02 112 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 A0A1W2PPC1 479 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 IGHV3-49A0A0A0MS15 119 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 ZIC3O60481 467 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 CD28P10747 220 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 ISXQ2M1V0 245 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 TMEM196Q5HYL7 178 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 ZNF818PQ6ZRF7 136 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 PNKDQ8N490 385 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 A6NNC1 897 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 PRTN3P24158 256 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 RPL32P62910 135 aaKnown RBP8.82□□□□□ -1
COL4A4-201ENST00000396625 CYP2G1PQ6ZSU1 146 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 VGLL1Q99990 258 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 GTSF1LQ9H1H1 148 aa8.82□□□□□ -1
COL4A4-201ENST00000396625 CHTOPQ9Y3Y2 248 aaKnown RBP8.82□□□□□ -1
COL4A4-201ENST00000396625 IGHV3-64A0A075B6Q5 118 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 F8WEM9 126 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 HRKO00198 91 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 JPT2Q9H910 190 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 IDI2-AS1Q9NZ38 188 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 TMEM238C9JI98 176 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 CGAP01215 116 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 HTN3P15516 51 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 HSPE1P61604 102 aaKnown RBP8.81□□□□□ -1
COL4A4-201ENST00000396625 NPC2P61916 151 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 C1orf122Q6ZSJ8 110 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 RSPO3Q9BXY4 272 aaPredicted RBP8.81□□□□□ -1
COL4A4-201ENST00000396625 LINC00587B1AMM8 73 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 ZPLD1Q8TCW7 415 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 TCF19Q9Y242 345 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 IGKV1D-42A0A075B6H8 117 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 OVOL2Q9BRP0 275 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 ITGB1BP1O14713 200 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 GDF15Q99988 308 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 NDUFAF3Q9BU61 184 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 ST20Q9HBF5 79 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 DENND4CQ5VZ89 1909 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 C21orf140B9A014 251 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 IFNL4K9M1U5 179 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 PCSK4Q6UW60 755 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 A0A0G2JLM5 398 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 IGHV3-23P01764 117 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 CTGFP29279 349 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 SRSF1Q07955 248 aaKnown RBP eCLIP8.81□□□□□ -1
COL4A4-201ENST00000396625 DLX4Q92988 240 aaPredicted RBP8.81□□□□□ -1
COL4A4-201ENST00000396625 UCP2P55851 309 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 ERVK11-1P61568 191 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 HMGCLL1Q8TB92 370 aa8.81□□□□□ -1
COL4A4-201ENST00000396625 PRRC2AP48634 2157 aaKnown RBP8.81□□□□□ -1
COL4A4-201ENST00000396625 IGKCP01834 107 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 TEX45Q8NA69 505 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 CENPVQ7Z7K6 275 aaPredicted RBP8.8□□□□□ -1
COL4A4-201ENST00000396625 PLSCR4Q9NRQ2 329 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 LRP5O75197 1615 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 HSD52Q0P140 79 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 MAFAQ8NHW3 353 aaPredicted RBP8.8□□□□□ -1
COL4A4-201ENST00000396625 EXPH5Q8NEV8 1989 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 IGHV3-35A0A0C4DH35 117 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 TRGV3P03979 118 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 ERG28Q9UKR5 140 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 MORN3Q6PF18 240 aaPredicted RBP8.8□□□□□ -1
COL4A4-201ENST00000396625 CELA2BP08218 269 aaPredicted RBP8.8□□□□□ -1
COL4A4-201ENST00000396625 TPTE2P1Q5T6R2 138 aa8.8□□□□□ -1
COL4A4-201ENST00000396625 UNQ9370/PRO34162Q6UXP9 181 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms