RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 A0A0B4J2A0 478 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 ANKRD34BA5PLL1 514 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 INS-IGF2F8WCM5 200 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 ST8SIA3O43173 380 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 WIPF1O43516 503 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 TRBV12-3P01733 135 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 UBE2MP61081 183 aaKnown RBP13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 OR2C3Q8N628 320 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 RNASE11Q8TAA1 199 aaKnown RBP13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 DCUN1D4Q92564 292 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 DLX4Q92988 240 aaPredicted RBP13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 GPR146Q96CH1 333 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 GPR61Q9BZJ8 451 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 WDR12Q9GZL7 423 aaKnown RBP13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 SHPKQ9UHJ6 478 aa13.67□□□□□ -0.22
TNFSF13-204ENST00000396542 LYRM1O43325 122 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 ZP3P21754 424 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 HOXD3P31249 432 aaPredicted RBP13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 MFAP2P55001 183 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 PPP1R1AQ13522 171 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 ZNF846Q147U1 533 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 PDLIM3Q53GG5 364 aaPredicted RBP13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 NMSQ5H8A3 153 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 FAM209BQ5JX69 171 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 LGI3Q8N145 548 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 LRTM2Q8N967 370 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 ZNF114Q8NC26 417 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 PLEKHA3Q9HB20 300 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 THYN1Q9P016 225 aa13.66□□□□□ -0.22
TNFSF13-204ENST00000396542 DNAH3Q8TD57 4116 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 PIGBOS1A0A0B4J2F0 54 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 CYB5BO43169 146 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 SFT2D2O95562 160 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 VAMP1P23763 118 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 MECP2P51608 486 aaKnown RBP13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 ANKRD55Q3KP44 614 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 LYZL2Q7Z4W2 148 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 OR1L6Q8NGR2 347 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 OR1P1Q8NH06 330 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 OR52E5Q8NH55 327 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 CXorf58Q96LI9 332 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 CCDC140Q96MF4 163 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 CACNG5Q9UF02 275 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 FLVCR2Q9UPI3 526 aa13.65□□□□□ -0.22
TNFSF13-204ENST00000396542 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 MFSD2BA6NFX1 497 aa13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 BMPR1BO00238 502 aa13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 OVOL1O14753 267 aa13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 IFNA17P01571 189 aa13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 DEFA6Q01524 100 aa13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 KLF5Q13887 457 aaPredicted RBP13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 EEF1AKMT3Q96AZ1 226 aa13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 PDCD10Q9BUL8 212 aa13.64□□□□□ -0.23
TNFSF13-204ENST00000396542 TRBV7-1A0A0A6YYK4 115 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 SEC14L6B5MCN3 397 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 SPCS3P61009 180 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 EGFEM1PQ0D2K5 195 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 SPINK9Q5DT21 86 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 C9orf66Q5T8R8 295 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 SLC25A24Q6NUK1 477 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 VN1R17PQ8TDU5 208 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 TBC1D24Q9ULP9 559 aa13.63□□□□□ -0.23
TNFSF13-204ENST00000396542 C9orf170A2RU37 121 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 UPK1BO75841 260 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 SULT1A3P0DMM9 295 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 SULT1A4P0DMN0 295 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 ERHP84090 104 aaKnown RBP13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 ASAH1Q13510 395 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 PVRIGQ6DKI7 326 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 ACSM6Q6P461 480 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 ZNF502Q8TBZ5 544 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 CACFD1Q9UGQ2 172 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 S4R3C0 116 aa13.62□□□□□ -0.23
TNFSF13-204ENST00000396542 K7EIM0 57 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 HLA-AP01891 365 aaKnown RBP13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 OR4E1P0C645 316 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 ANXA7P20073 488 aaKnown RBP13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 INSL3P51460 131 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 SMCO1Q147U7 214 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 RPEL1Q2QD12 228 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 BSXQ3C1V8 233 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 CLEC19AQ6UXS0 136 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 ATP6V0BQ99437 205 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 C20orf85Q9H1P6 137 aa13.61□□□□□ -0.23
TNFSF13-204ENST00000396542 A0A1B0GU03 582 aa13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 PPP5D1E7EU14 171 aa13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 TCRBP04435 133 aa13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 HOXA1P49639 335 aaPredicted RBP13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 IFITM3Q01628 133 aa13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 DHRS2Q13268 280 aa13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 LYG2Q86SG7 212 aa13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 HSPB7Q9UBY9 170 aa13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 TMED3Q9Y3Q3 217 aa13.6□□□□□ -0.23
TNFSF13-204ENST00000396542 I3L2K1 104 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 GGCTO75223 188 aaKnown RBP13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 PITX3O75364 302 aa13.59□□□□□ -0.23
TNFSF13-204ENST00000396542 CLEC3BP05452 202 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms