RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NDUFA4L2Q9NRX3 87 aa12.25□□□□□ -0.45
DDR1-229ENST00000396342 CGB1A6NKQ9 187 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 MFAP4P55083 255 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 ERHP84090 104 aaKnown RBP12.24□□□□□ -0.45
DDR1-229ENST00000396342 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 FCAMRQ8WWV6 532 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 MISP3Q96FF7 219 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 GALNT14Q96FL9 552 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 OVOL2Q9BRP0 275 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 GINS3Q9BRX5 216 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 UBQLN2Q9UHD9 624 aa12.24□□□□□ -0.45
DDR1-229ENST00000396342 A0A087WXM4 84 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 IGHV3-21A0A0B4J1V1 117 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 HLA-DMAP28067 261 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 HRH1P35367 487 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 SNCAP37840 140 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 WT1-ASQ06250 92 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 PHLDA2Q53GA4 152 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 OR1P1Q8NH06 330 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 SCARB1Q8WTV0 552 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 TXN2Q99757 166 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 PDCD10Q9BUL8 212 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 SCPEP1Q9HB40 452 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 FAM212BQ9NTI7 297 aaPredicted RBP12.23□□□□□ -0.45
DDR1-229ENST00000396342 NSG2Q9Y328 171 aa12.23□□□□□ -0.45
DDR1-229ENST00000396342 GNG7O60262 68 aa12.22□□□□□ -0.45
DDR1-229ENST00000396342 LY6G6CO95867 125 aa12.22□□□□□ -0.45
DDR1-229ENST00000396342 LSM3P62310 102 aaKnown RBP12.22□□□□□ -0.45
DDR1-229ENST00000396342 TMEM116Q8NCL8 245 aa12.22□□□□□ -0.45
DDR1-229ENST00000396342 SLC25A46Q96AG3 418 aa12.22□□□□□ -0.45
DDR1-229ENST00000396342 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 RCVRNP35243 200 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 NPBWR1P48145 328 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 SUB1P53999 127 aaKnown RBP eCLIP12.21□□□□□ -0.45
DDR1-229ENST00000396342 DEFB135Q30KP9 77 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 MZT2AQ6P582 158 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 LYG2Q86SG7 212 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 CENPSQ8N2Z9 138 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 TMEM231Q9H6L2 316 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 ENY2Q9NPA8 101 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 COMMD3Q9UBI1 195 aa12.21□□□□□ -0.45
DDR1-229ENST00000396342 HUWE1Q7Z6Z7 4374 aaKnown RBP12.21□□□□□ -0.46
DDR1-229ENST00000396342 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 A0A0J9YWU9 116 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 DNASE2O00115 360 aaPredicted RBP12.2□□□□□ -0.46
DDR1-229ENST00000396342 ZNF207O43670 478 aaKnown RBP12.2□□□□□ -0.46
DDR1-229ENST00000396342 TNFAIP8O95379 198 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 CTSDP07339 412 aaPredicted RBP12.2□□□□□ -0.46
DDR1-229ENST00000396342 PGAM2P15259 253 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
DDR1-229ENST00000396342 NAT1P18440 290 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 RPS19P39019 145 aaKnown RBP12.2□□□□□ -0.46
DDR1-229ENST00000396342 TNFRSF9Q07011 255 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 TBC1D26Q86UD7 250 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 WFDC3Q8IUB2 231 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 SNX29P2Q8IUI4 249 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 RNASE11Q8TAA1 199 aaKnown RBP12.2□□□□□ -0.46
DDR1-229ENST00000396342 PINX1Q96BK5 328 aaKnown RBP12.2□□□□□ -0.46
DDR1-229ENST00000396342 NARS2Q96I59 477 aaKnown RBP12.2□□□□□ -0.46
DDR1-229ENST00000396342 RHPN1-AS1Q9BWJ2 59 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
DDR1-229ENST00000396342 FAM25AB3EWG3 89 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 FAM25CB3EWG5 89 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 FAM25GB3EWG6 89 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 APOA1P02647 267 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 TFPI2P48307 235 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 RPL11P62913 178 aaKnown RBP12.19□□□□□ -0.46
DDR1-229ENST00000396342 SLC35G3Q8N808 338 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 DUSP18Q8NEJ0 188 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 C15orf40Q8WUR7 153 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 AP3S1Q92572 193 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 CHRDL1Q9BU40 450 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 SMPXQ9UHP9 88 aa12.19□□□□□ -0.46
DDR1-229ENST00000396342 IGHV3OR16-8A0A075B7F1 116 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 IGHV7-4-1A0A0J9YVY3 117 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 MPTX1A8MV57 137 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 IFNA17P01571 189 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 ATF4P18848 351 aaPredicted RBP12.18□□□□□ -0.46
DDR1-229ENST00000396342 AKR1C2P52895 323 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 HSPE1P61604 102 aaKnown RBP12.18□□□□□ -0.46
DDR1-229ENST00000396342 CEMP1Q6PRD7 247 aaPredicted RBP12.18□□□□□ -0.46
DDR1-229ENST00000396342 RNF183Q96D59 192 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 MFFQ9GZY8 342 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 FXYD6Q9H0Q3 95 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 ANAPC10Q9UM13 185 aa12.18□□□□□ -0.46
DDR1-229ENST00000396342 IGKV3-7A0A075B6H7 116 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 K7EIM0 57 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 CORTO00230 105 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 MT-CO2P00403 227 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 IFNA4P05014 189 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 CTSGP08311 255 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 UCP3P55916 312 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 PRCDQ00LT1 54 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 RNASE10Q5GAN6 216 aaKnown RBP12.17□□□□□ -0.46
DDR1-229ENST00000396342 GATAD1Q8WUU5 269 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 RRNAD1Q96FB5 475 aaKnown RBP12.17□□□□□ -0.46
DDR1-229ENST00000396342 ZNF486Q96H40 463 aaPredicted RBP12.17□□□□□ -0.46
DDR1-229ENST00000396342 CSTL1Q9H114 145 aa12.17□□□□□ -0.46
DDR1-229ENST00000396342 FCGR2BP31994 310 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms