RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MIR7-3HGQ8N6C7 128 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 ZIC4Q8N9L1 334 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 OR13C8Q8NGS7 320 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 OR2T27Q8NH04 317 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 TMEM131Q92545 1883 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 MS4A6EQ96DS6 147 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 GNPNAT1Q96EK6 184 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 ERBINQ96RT1 1412 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 LINC01587Q99440 93 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 SMIM3Q9BZL3 60 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 CXorf21Q9HAI6 301 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 CACYBPQ9HB71 228 aaKnown RBP2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 KCNIP2Q9NS61 270 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 DHCR7Q9UBM7 475 aaKnown RBP2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 AK3Q9UIJ7 227 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 HIGD1AQ9Y241 93 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 ZFP30Q9Y2G7 519 aa2.89□□□□□ -1.95
HMGB1P10-201ENST00000395823 TTC37Q6PGP7 1564 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 CD109Q6YHK3 1445 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 SSH2Q76I76 1423 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 TMED7-TICAM2A0A0A6YYA0 188 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 TRAV38-1A0A0B4J264 116 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 FABP5P3A8MUU1 101 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 C9JQL5 133 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 TMEM250H0YL14 139 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 GNG7O60262 68 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 APOMO95445 188 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 OR2H2O95918 312 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 IGKV3-11P04433 115 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 CSN2P05814 226 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 BCL2P10415 239 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 FGF7P21781 194 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 SRIP30626 198 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 CCR2P41597 374 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 LYRM7Q5U5X0 104 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 DEFB132Q7Z7B7 95 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 TCTEX1D1Q8N7M0 179 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 OR51T1Q8NGJ9 327 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 RTN4IP1Q8WWV3 396 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 PSMG3Q9BT73 122 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 THTPAQ9BU02 230 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 RTL8AQ9BWD3 113 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 SLC23A2Q9UGH3 650 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 BAIAP2Q9UQB8 552 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 MED31Q9Y3C7 131 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 ZNF706Q9Y5V0 76 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 ZCCHC11Q5TAX3 1644 aaKnown RBP2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 EPRSP07814 1512 aaKnown RBP2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 TOPBP1Q92547 1522 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 DYSFO75923 2080 aa2.88□□□□□ -1.95
HMGB1P10-201ENST00000395823 IBTKQ9P2D0 1353 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 NWD1Q149M9 1564 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 PCNTO95613 3336 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 NAIPQ13075 1403 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 IGKV2-28A0A075B6P5 120 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 MEIS3P1A6NDR6 274 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 B4DEV8 164 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 DPM2O94777 84 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 IGKV2D-28P01615 120 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 PRB2P02812 416 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 IL4P05112 153 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 UCHL1P09936 223 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 CCL1P22362 96 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 RPS3P23396 243 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 EVX1P49640 407 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 EIF2B2P49770 351 aaKnown RBP2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 GABARAPL2P60520 117 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 MAXP61244 160 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 HERVK_113P63121 156 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 ATP5G2Q06055 141 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 ELOCQ15369 112 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 FAM104BQ5XKR9 115 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 GLT8D1Q68CQ7 371 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 Q6Q795 121 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 LINC00596Q86U02 117 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 ZDHHC22Q8N966 263 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 OR52R1Q8NGF1 315 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 TMEM106AQ96A25 262 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 MAGOHBQ96A72 148 aaKnown RBP2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 FXYD5Q96DB9 178 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 SLAMF6Q96DU3 332 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 ABHD14BQ96IU4 210 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 SPANXDQ9BXN6 97 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 OR2J1Q9GZK6 312 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 OR8D2Q9GZM6 311 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 LPAR5Q9H1C0 372 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 GTSF1LQ9H1H1 148 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 ANAPC10Q9UM13 185 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 HS3ST2Q9Y278 367 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 SHANK2Q9UPX8 1470 aa2.87□□□□□ -1.95
HMGB1P10-201ENST00000395823 ZNF609O15014 1411 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 SIGLEC1Q9BZZ2 1709 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 IGLV3-12A0A075B6K2 115 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 TRAV4A0A0B4J268 109 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 TMEM218A2RU14 115 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 RPL36A-HNRNPH2H7BZ11 118 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 ISLRO14498 428 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 OVOL1O14753 267 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 DEDDO75618 318 aa2.86□□□□□ -1.95
HMGB1P10-201ENST00000395823 OPN1SWP03999 348 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms