RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 CMTM3Q96MX0 182 aa9.69□□□□□ -0.86
CHCHD2-201ENST00000395422 NDUFA4L2Q9NRX3 87 aa9.69□□□□□ -0.86
CHCHD2-201ENST00000395422 CLEC5AQ9NY25 188 aa9.69□□□□□ -0.86
CHCHD2-201ENST00000395422 TRAV14DV4A0A0A6YYC5 116 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 IGHV3-66A0A0C4DH42 116 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 IFITM5A6NNB3 132 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 CYB5BO43169 146 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 SSX5O60225 188 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 HPRT1P00492 218 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 CD74P04233 296 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 THOC7Q6I9Y2 204 aaKnown RBP9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 Q6ZRM9 215 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 STHQ8IWL8 128 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 CSNK1G2-AS1Q8NCQ2 148 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 SECTM1Q8WVN6 248 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 DGCR14Q96DF8 476 aaKnown RBP9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 AIFM2Q9BRQ8 373 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 NDUFAF3Q9BU61 184 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 ATG5Q9H1Y0 275 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 DCSTAMPQ9H295 470 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 ANXA10Q9UJ72 324 aa9.68□□□□□ -0.86
CHCHD2-201ENST00000395422 METTL21EPA6NDL7 271 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 TMEM235A6NFC5 223 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 CDK2AP2O75956 126 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 DFFBO76075 338 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 FGF2P09038 288 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 PAFAH1B2P68402 229 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 RELQ04864 619 aaPredicted RBP9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 TRAM1Q15629 374 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 HSD17B13Q7Z5P4 300 aaPredicted RBP9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 PACRGLQ8N7B6 248 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 OR1L8Q8NGR8 309 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 OR13F1Q8NGS4 319 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 LSM10Q969L4 123 aaKnown RBP9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 HINT2Q9BX68 163 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 NXF2Q9GZY0 626 aaKnown RBP9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 VSIRQ9H7M9 311 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 NSG2Q9Y328 171 aa9.67□□□□□ -0.86
CHCHD2-201ENST00000395422 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 I3L2K1 104 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 DNASE2O00115 360 aaPredicted RBP9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 ST8SIA3O43173 380 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 IGHV3-48P01763 117 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 PSMA1P25786 263 aaKnown RBP9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 FCGR2CP31995 323 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 RANBP1P43487 201 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 MSMO1Q15800 293 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 CENPSQ8N2Z9 138 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 DMBX1Q8NFW5 382 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 PLEKHA2Q9HB19 425 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 TBC1D24Q9ULP9 559 aa9.66□□□□□ -0.86
CHCHD2-201ENST00000395422 DBX1A6NMT0 343 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 C16orf90A8MZG2 172 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 PPYP01298 95 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 IFNA10P01566 189 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 MLLT11Q13015 90 aaPredicted RBP9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 ARL6IP1Q15041 203 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 TOMM20LQ6UXN7 152 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 ZNF818PQ6ZRF7 136 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 OR51H1Q8NH63 302 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 SLC25A46Q96AG3 418 aa9.65□□□□□ -0.86
CHCHD2-201ENST00000395422 TRAV2A0A0B4J234 112 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 TRAV1-2A0A0B4J238 106 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 SMIM30A4D0T7 59 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 ERICH4A6NGS2 130 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 MARCH11A6NNE9 402 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 SPP1P10451 314 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 RPL11P62913 178 aaKnown RBP9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 TNP2Q05952 138 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 TMEM41BQ5BJD5 291 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 UBE2UQ5VVX9 321 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 MORN3Q6PF18 240 aaPredicted RBP9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 ZBTB34Q8NCN2 500 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 SLC5A7Q9GZV3 580 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 ACOT13Q9NPJ3 140 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 C8orf4Q9NR00 106 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 TMEM14BQ9NUH8 114 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 COMMD9Q9P000 198 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 RABAC1Q9UI14 185 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 OR51B2Q9Y5P1 312 aa9.64□□□□□ -0.87
CHCHD2-201ENST00000395422 PDCD5O14737 125 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 CD5P06127 495 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 MFAP4P55083 255 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 FXYD4P59646 89 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 GNG2P59768 71 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 CATR1Q13166 79 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 AADACL3Q5VUY0 350 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 UBE2DNLQ8IWF7 75 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 Q8N1X5 172 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 OR1P1Q8NH06 330 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 MISP3Q96FF7 219 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
CHCHD2-201ENST00000395422 K7EQG2 157 aa9.62□□□□□ -0.87
CHCHD2-201ENST00000395422 MT-CO2P00403 227 aa9.62□□□□□ -0.87
CHCHD2-201ENST00000395422 IFNA21P01568 189 aa9.62□□□□□ -0.87
CHCHD2-201ENST00000395422 IFNA17P01571 189 aa9.62□□□□□ -0.87
CHCHD2-201ENST00000395422 EIF4EP06730 217 aaKnown RBP9.62□□□□□ -0.87
CHCHD2-201ENST00000395422 ZNF688P0C7X2 276 aa9.62□□□□□ -0.87
CHCHD2-201ENST00000395422 RAB3BP20337 219 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms