RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ICAM4Q14773 271 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 ASPHD1Q5U4P2 390 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 EIF4E3Q8N5X7 224 aaKnown RBP12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 COMMD1Q8N668 190 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 CRYBG3Q68DQ2 2970 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 KMT2EQ8IZD2 1858 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 IGHV3OR16-13A0A075B7E8 117 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 IGHV3-74A0A0B4J1X5 117 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 BTBD17A6NE02 478 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 NPIPB11E5RHQ5 1161 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 RANP62826 216 aaKnown RBP12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 RNF212Q495C1 297 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 HEPN1Q6WQI6 88 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 FAM169BQ8N8A8 192 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 TPPP3Q9BW30 176 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 LOC105371242A0A075B767 164 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 PPOXP50336 477 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 CLDND2Q8NHS1 167 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 ZNF835Q9Y2P0 537 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 CFAP46Q8IYW2 2715 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 CD5P06127 495 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 LINC00869P0C866 280 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 ADORA2A-AS1P86434 159 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 SPSB3Q6PJ21 355 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 PERPQ96FX8 193 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 SSX3Q99909 188 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 CLEC7AQ9BXN2 247 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 ZNF430Q9H8G1 570 aaPredicted RBP12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 LINC00527Q9UJ94 153 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 HECTD1Q9ULT8 2610 aa12.98□□□□□ -0.33
SMARCD1-202ENST00000394963 LHBP01229 141 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 IGHV1-8P0DP01 117 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 RPL27AP46776 148 aaKnown RBP12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 TREML4Q6UXN2 200 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 SEPSECSQ9HD40 501 aaKnown RBP12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 MDFIC2A0A1B0GVS7 189 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 LOXP28300 417 aaPredicted RBP12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 UBE2L3P68036 154 aaKnown RBP12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 ECSCRQ19T08 205 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 TMEM14EPQ6UXP3 125 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 ODF3L1Q8IXM7 274 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 MAPK1IP1LQ8NDC0 245 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 NEIL1Q96FI4 390 aaPredicted RBP12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 RITA1Q96K30 269 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 DERL1Q9BUN8 251 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 TMEM133Q9H2Q1 129 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 FABP9Q0Z7S8 132 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 BSXQ3C1V8 233 aa12.97□□□□□ -0.33
SMARCD1-202ENST00000394963 F2RL2O00254 374 aa12.96□□□□□ -0.33
SMARCD1-202ENST00000394963 FOXH1O75593 365 aa12.96□□□□□ -0.33
SMARCD1-202ENST00000394963 IL6RP08887 468 aaPredicted RBP12.96□□□□□ -0.33
SMARCD1-202ENST00000394963 RHOBP62745 196 aa12.96□□□□□ -0.33
SMARCD1-202ENST00000394963 GAMTQ14353 236 aa12.96□□□□□ -0.33
SMARCD1-202ENST00000394963 ZNF726P1Q15940 193 aa12.96□□□□□ -0.33
SMARCD1-202ENST00000394963 MIR17HGQ75NE6 70 aa12.96□□□□□ -0.33
SMARCD1-202ENST00000394963 IGKV3-7A0A075B6H7 116 aa12.96□□□□□ -0.34
SMARCD1-202ENST00000394963 TEX50A0A1B0GTY4 177 aa12.96□□□□□ -0.34
SMARCD1-202ENST00000394963 HTR1DP28221 377 aa12.96□□□□□ -0.34
SMARCD1-202ENST00000394963 KHDC3LQ587J8 217 aa12.96□□□□□ -0.34
SMARCD1-202ENST00000394963 MARVELD3Q96A59 401 aa12.96□□□□□ -0.34
SMARCD1-202ENST00000394963 NANPQ8TBE9 248 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 NRGNQ92686 78 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 PARLQ9H300 379 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 TRAV5A0A0B4J249 113 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 TIMM23O14925 209 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 LIPFP07098 398 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 ST6GALNAC3Q8NDV1 305 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 VSTM2AQ8TAG5 236 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 ZNF320A2RRD8 509 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 RAB5AP20339 215 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 GATA4P43694 442 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 ZNF295-AS1Q8N0V1 137 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 NABP2Q9BQ15 211 aa12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 SSBP3Q9BWW4 388 aaPredicted RBP12.95□□□□□ -0.34
SMARCD1-202ENST00000394963 IGHV2-26A0A0B4J1V2 119 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 UPK2O00526 184 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 ERVFC1-1P60608 527 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 SLC25A48Q6ZT89 311 aaKnown RBP12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 FKBP11Q9NYL4 201 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 F6UZH7 168 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 AREGP15514 252 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 LY6EQ16553 131 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 SLC16A13Q7RTY0 426 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 TMEM186Q96B77 213 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 MS4A10Q96PG2 267 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 PPP5D1E7EU14 171 aa12.94□□□□□ -0.34
SMARCD1-202ENST00000394963 LOC102723971A0A1B0GUV8 181 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 TRGC2P03986 189 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 Q56UQ5 140 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 TCF23Q7RTU1 214 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 TCTEX1D1Q8N7M0 179 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 HIST1H2BAQ96A08 127 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 CARHSP1Q9Y2V2 147 aaKnown RBP12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 UTP20O75691 2785 aaKnown RBP12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 IGHV3-49A0A0A0MS15 119 aa12.93□□□□□ -0.34
SMARCD1-202ENST00000394963 CRYBB3P26998 211 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms