RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 FGF9P31371 208 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-203ENST00000394925 SFXN4Q6P4A7 337 aa15.47■□□□□ 0.07
TRAF4-203ENST00000394925 TPRA1Q86W33 373 aa15.47■□□□□ 0.07
TRAF4-203ENST00000394925 GBGT1Q8N5D6 347 aa15.47■□□□□ 0.07
TRAF4-203ENST00000394925 TMEM116Q8NCL8 245 aa15.47■□□□□ 0.07
TRAF4-203ENST00000394925 CNBD2Q96M20 576 aa15.47■□□□□ 0.07
TRAF4-203ENST00000394925 OR51B2Q9Y5P1 312 aa15.47■□□□□ 0.07
TRAF4-203ENST00000394925 YIF1AO95070 293 aa15.46■□□□□ 0.07
TRAF4-203ENST00000394925 OR5H6Q8NGV6 325 aa15.46■□□□□ 0.07
TRAF4-203ENST00000394925 GIMAP1Q8WWP7 306 aa15.46■□□□□ 0.07
TRAF4-203ENST00000394925 ZNF414Q96IQ9 312 aa15.46■□□□□ 0.07
TRAF4-203ENST00000394925 RYR1P21817 5038 aa15.45■□□□□ 0.06
TRAF4-203ENST00000394925 IGHV3OR16-13A0A075B7E8 117 aa15.45■□□□□ 0.06
TRAF4-203ENST00000394925 IGHV3-74A0A0B4J1X5 117 aa15.45■□□□□ 0.06
TRAF4-203ENST00000394925 CA1P00915 261 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-203ENST00000394925 GNRHRP30968 328 aa15.45■□□□□ 0.06
TRAF4-203ENST00000394925 RELQ04864 619 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-203ENST00000394925 OR5AP2Q8NGF4 316 aa15.45■□□□□ 0.06
TRAF4-203ENST00000394925 SLC25A38Q96DW6 304 aa15.45■□□□□ 0.06
TRAF4-203ENST00000394925 CMTM3Q96MX0 182 aa15.45■□□□□ 0.06
TRAF4-203ENST00000394925 IGLL5B9A064 214 aa15.44■□□□□ 0.06
TRAF4-203ENST00000394925 NUPL2O15504 423 aaKnown RBP15.44■□□□□ 0.06
TRAF4-203ENST00000394925 MRPS14O60783 128 aaKnown RBP15.44■□□□□ 0.06
TRAF4-203ENST00000394925 SNAPC5O75971 98 aa15.44■□□□□ 0.06
TRAF4-203ENST00000394925 KRASP01116 189 aa15.44■□□□□ 0.06
TRAF4-203ENST00000394925 RLN1P04808 185 aa15.44■□□□□ 0.06
TRAF4-203ENST00000394925 TCTAP57738 103 aa15.44■□□□□ 0.06
TRAF4-203ENST00000394925 HERV-K104P61576 105 aa15.44■□□□□ 0.06
TRAF4-203ENST00000394925 TRAV14DV4A0A0A6YYC5 116 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 MEIS3P1A6NDR6 274 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 F2RP25116 425 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 PSMB9P28065 219 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 G6PCP35575 357 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 LPAR6P43657 344 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 MXD1Q05195 221 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 TMEM187Q14656 261 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 FAM90A2PQ658T7 463 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 FCAMRQ8WWV6 532 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 OR10C1Q96KK4 312 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 TMEM56Q96MV1 263 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 AUNIPQ9H7T9 357 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 APLNQ9ULZ1 77 aa15.43■□□□□ 0.06
TRAF4-203ENST00000394925 PGLYRP1O75594 196 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-203ENST00000394925 CLEC2LP0C7M8 214 aa15.42■□□□□ 0.06
TRAF4-203ENST00000394925 SDC2P34741 201 aa15.42■□□□□ 0.06
TRAF4-203ENST00000394925 PAFAH1B2P68402 229 aa15.42■□□□□ 0.06
TRAF4-203ENST00000394925 BORCS5Q969J3 196 aa15.42■□□□□ 0.06
TRAF4-203ENST00000394925 SLC25A46Q96AG3 418 aa15.42■□□□□ 0.06
TRAF4-203ENST00000394925 MISP3Q96FF7 219 aa15.42■□□□□ 0.06
TRAF4-203ENST00000394925 SSR3Q9UNL2 185 aa15.42■□□□□ 0.06
TRAF4-203ENST00000394925 MFAP4P55083 255 aa15.41■□□□□ 0.06
TRAF4-203ENST00000394925 IDNKQ5T6J7 187 aa15.41■□□□□ 0.06
TRAF4-203ENST00000394925 UBE2UQ5VVX9 321 aa15.41■□□□□ 0.06
TRAF4-203ENST00000394925 TCF24Q7RTU0 167 aa15.41■□□□□ 0.06
TRAF4-203ENST00000394925 TSPAN14Q8NG11 270 aa15.41■□□□□ 0.06
TRAF4-203ENST00000394925 OR1P1Q8NH06 330 aa15.41■□□□□ 0.06
TRAF4-203ENST00000394925 DGCR14Q96DF8 476 aaKnown RBP15.41■□□□□ 0.06
TRAF4-203ENST00000394925 EHFQ9NZC4 300 aa15.41■□□□□ 0.06
TRAF4-203ENST00000394925 PRNDQ9UKY0 176 aa15.41■□□□□ 0.06
TRAF4-203ENST00000394925 A0A0A6YYH2 397 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 A6NJ64 397 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 DBX1A6NMT0 343 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 I3L2K1 104 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 IGHV3-48P01763 117 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 CBX5P45973 191 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 LEMD1Q68G75 181 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 IZUMO2Q6UXV1 221 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 NXF2Q9GZY0 626 aaKnown RBP15.4■□□□□ 0.06
TRAF4-203ENST00000394925 DIABLOQ9NR28 239 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 FKBP11Q9NYL4 201 aa15.4■□□□□ 0.06
TRAF4-203ENST00000394925 XRCC3O43542 346 aa15.39■□□□□ 0.05
TRAF4-203ENST00000394925 EIF4EP06730 217 aaKnown RBP15.39■□□□□ 0.05
TRAF4-203ENST00000394925 RFX2P48378 723 aa15.39■□□□□ 0.05
TRAF4-203ENST00000394925 SCAND1P57086 179 aa15.39■□□□□ 0.05
TRAF4-203ENST00000394925 DEFB131AP59861 70 aa15.39■□□□□ 0.05
TRAF4-203ENST00000394925 CADM3Q8N126 398 aa15.39■□□□□ 0.05
TRAF4-203ENST00000394925 TXN2Q99757 166 aa15.39■□□□□ 0.05
TRAF4-203ENST00000394925 ZNF2Q9BSG1 426 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-203ENST00000394925 IFT46Q9NQC8 304 aa15.39■□□□□ 0.05
TRAF4-203ENST00000394925 C15orf61A6NNL5 157 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 C11orf94C9JXX5 98 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 DNASE2O00115 360 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-203ENST00000394925 MT-CO2P00403 227 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 GABARAPL2P60520 117 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 DHRS11Q6UWP2 260 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 ST8SIA2Q92186 375 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 MOB3AQ96BX8 217 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 MS4A6AQ9H2W1 248 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 RNF167Q9H6Y7 350 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 TMEM14BQ9NUH8 114 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 AGRNO00468 2067 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 PKHD1P08F94 4074 aa15.38■□□□□ 0.05
TRAF4-203ENST00000394925 ST8SIA3O43173 380 aa15.37■□□□□ 0.05
TRAF4-203ENST00000394925 GNG7O60262 68 aa15.37■□□□□ 0.05
TRAF4-203ENST00000394925 APOHP02749 345 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-203ENST00000394925 HSPA13P48723 471 aa15.37■□□□□ 0.05
TRAF4-203ENST00000394925 CMTM1Q8IZ96 169 aa15.37■□□□□ 0.05
TRAF4-203ENST00000394925 SPARTQ8N0X7 666 aa15.37■□□□□ 0.05
TRAF4-203ENST00000394925 LILRB2Q8N423 598 aa15.37■□□□□ 0.05
TRAF4-203ENST00000394925 Q8NAQ8 132 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms