RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TXNDC17Q9BRA2 123 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 COMMD5Q9GZQ3 224 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 SLC45A2Q9UMX9 530 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 URGCP-MRPS24S4R325 110 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 IGKV1OR2-108A0A075B7D4 117 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 CGB1A6NKQ9 187 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 E7EUB6 86 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 UBE2CO00762 179 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 PDE6DO43924 150 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 RBP4P02753 201 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 LINC00869P0C866 280 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 IGFBP2P18065 325 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 RPL35P42766 123 aaKnown RBP7.32□□□□□ -1.24
TDP1-202ENST00000393452 RPL23P62829 140 aaKnown RBP7.32□□□□□ -1.24
TDP1-202ENST00000393452 CACNG8Q8WXS5 425 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 SEPSECSQ9HD40 501 aaKnown RBP7.32□□□□□ -1.24
TDP1-202ENST00000393452 METTL1Q9UBP6 276 aaKnown RBP7.32□□□□□ -1.24
TDP1-202ENST00000393452 HIVEP3Q5T1R4 2406 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 TGIF2-C20orf24A0A0A6YYL0 155 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 IGHV2-26A0A0B4J1V2 119 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 VENTXO95231 258 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 IL3RAP26951 378 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 RPS10P46783 165 aaKnown RBP7.31□□□□□ -1.24
TDP1-202ENST00000393452 RHOBP62745 196 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 CD69Q07108 199 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 GAMTQ14353 236 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 ZNF674Q2M3X9 581 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 HLA-DRB5Q30154 266 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 SPTBN1Q01082 2364 aaKnown RBP7.31□□□□□ -1.24
TDP1-202ENST00000393452 TRBV24-1A0A075B6N3 115 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 A0A1W2PN81 502 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 S100A6P06703 90 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 CHRNA7P36544 502 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 LGALS7P47929 136 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 ATP5G3P48201 142 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 AKR1D1P51857 326 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 ERHP84090 104 aaKnown RBP7.31□□□□□ -1.24
TDP1-202ENST00000393452 ADIRFQ15847 76 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 MRGPRG-AS1Q2M3A8 158 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 MOB3BQ86TA1 216 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 OR51G1Q8NGK1 321 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 NANPQ8TBE9 248 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 C12orf57Q99622 126 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 SSX3Q99909 188 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 ZNF430Q9H8G1 570 aaPredicted RBP7.31□□□□□ -1.24
TDP1-202ENST00000393452 DOK5Q9P104 306 aa7.31□□□□□ -1.24
TDP1-202ENST00000393452 KALRNO60229 2985 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 F6UZH7 168 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 GPX4P36969 197 aaPredicted RBP7.3□□□□□ -1.24
TDP1-202ENST00000393452 GNB1P62873 340 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 WT1-ASQ06250 92 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 C11orf71Q6IPW1 123 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 PNKDQ8N490 385 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 BEND2Q8NDZ0 799 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 RITA1Q96K30 269 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 CACNA1AO00555 2505 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 CLN5O75503 358 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 PFN1P07737 140 aaKnown RBP7.3□□□□□ -1.24
TDP1-202ENST00000393452 C1QTNF9P0C862 333 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 GCHFRP30047 84 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 PRRX1P54821 245 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 UBE2G2P60604 165 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 MLANAQ16655 118 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 VMA21Q3ZAQ7 101 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 SPATA31B1PQ5VZV4 182 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 CST9LP1Q5W188 147 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 LY6G5BQ8NDX9 201 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 SLC35E1Q96K37 410 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 FAM210BQ96KR6 192 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 RAB1BQ9H0U4 201 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 CBLN4Q9NTU7 201 aa7.3□□□□□ -1.24
TDP1-202ENST00000393452 PPIAL4CA0A0B4J2A2 164 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 BUB1B-PAK6H3BSN5 160 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 AP4M1O00189 453 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 SLC25A17O43808 307 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 PPIAL4GP0DN37 164 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 C10orf55Q5SWW7 151 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 C16orf82Q7Z2V1 217 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 TEX45Q8NA69 505 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 RNASEH2CQ8TDP1 164 aaKnown RBP7.29□□□□□ -1.24
TDP1-202ENST00000393452 PYGO2Q9BRQ0 406 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 C19orf24Q9BVV8 132 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 CLEC7AQ9BXN2 247 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 MIOXQ9UGB7 285 aa7.29□□□□□ -1.24
TDP1-202ENST00000393452 NDUFB4O95168 129 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 CRYGBP07316 175 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 OR10J1P30954 320 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 FABP9Q0Z7S8 132 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 FAM78BQ5VT40 261 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 PVRIGQ6DKI7 326 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 SLC16A13Q7RTY0 426 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 OR8B3Q8NGG8 313 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 OR4P4Q8NGL7 312 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 OR8B2Q96RD0 313 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 PRORYQ9H606 182 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 FNDC4Q9H6D8 234 aaPredicted RBP7.28□□□□□ -1.24
TDP1-202ENST00000393452 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 FUT9Q9Y231 359 aa7.28□□□□□ -1.24
TDP1-202ENST00000393452 YTHDF2Q9Y5A9 579 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms