RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MEIG1Q5JSS6 88 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 FAM131CQ96AQ9 280 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 GPR82Q96P67 336 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 TP73-AS1Q9UF72 201 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 PHF3Q92576 2039 aaKnown RBP6.42□□□□□ -1.38
VTI1A-201ENST00000393077 IGKV1D-42A0A075B6H8 117 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 PSMB2P49721 201 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 ATP5J2P56134 94 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 PRR31Q5SQ13 230 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 SLC23A3Q6PIS1 610 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 TTC9CQ8N5M4 171 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 Q96M66 194 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 FSCN3Q9NQT6 498 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF318Q5VUA4 2279 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 TSC2P49815 1807 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 SH2D7A6NKC9 451 aaPredicted RBP6.42□□□□□ -1.38
VTI1A-201ENST00000393077 WNT2P09544 360 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 GCHFRP30047 84 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 PLP2Q04941 152 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 ALKBH6Q3KRA9 238 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 MIC13Q5XKP0 118 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 TP53TG3Q9ULZ0 132 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 IGHV5-51A0A0C4DH38 117 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 MLNRO43193 412 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 IGHV3-7P01780 117 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 IGHV4-34P06331 123 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 CENPVQ7Z7K6 275 aaPredicted RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 UBALD1Q8TB05 177 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 SSC4DQ8WTU2 575 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 NEUROG1Q92886 237 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 CHCHD1Q96BP2 118 aaKnown RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF414Q96IQ9 312 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 RAX2Q96IS3 184 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 SPAG8Q99932 426 aaPredicted RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 FRMPD3Q5JV73 1810 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 IGKV1-8A0A0C4DH67 115 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 RPL13AP40429 203 aaKnown RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 HBBP68871 147 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 SRSF9Q13242 221 aaKnown RBP eCLIP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 MAFAQ8NHW3 353 aaPredicted RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 KCNK17Q96T54 332 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 RNF114Q9Y508 228 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 MDC1Q14676 2089 aaKnown RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 LOC389332A0A1B0GUA5 103 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 PRSS29PA6NIE9 313 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 SHISA8B8ZZ34 492 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 DXOO77932 396 aaKnown RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 P01737 135 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 SCTP09683 121 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 IFITM1P13164 125 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 VDAC2P45880 294 aaPredicted RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 SFTA2Q6UW10 78 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 LINC00114Q6XXX2 140 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 SPATA12Q7Z6I5 190 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 SDK2Q58EX2 2172 aa6.41□□□□□ -1.38
VTI1A-201ENST00000393077 ARHGEF17Q96PE2 2063 aaPredicted RBP6.41□□□□□ -1.38
VTI1A-201ENST00000393077 C4orf51C9J302 202 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 SMAD7O15105 426 aaKnown RBP6.4□□□□□ -1.38
VTI1A-201ENST00000393077 IGKV1D-16P01601 117 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 PEBP1P30086 187 aaKnown RBP6.4□□□□□ -1.38
VTI1A-201ENST00000393077 PPIFP30405 207 aaKnown RBP6.4□□□□□ -1.38
VTI1A-201ENST00000393077 FCGR2BP31994 310 aaPredicted RBP6.4□□□□□ -1.38
VTI1A-201ENST00000393077 TBR1Q16650 682 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 NRN1LQ496H8 165 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 AMTNQ6UX39 209 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 NT5CQ8TCD5 201 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 TM2D1Q9BX74 207 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 C1QTNF5Q9BXJ0 243 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 WNT16Q9UBV4 365 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 COL4A6Q14031 1691 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 PLCE1Q9P212 2302 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 KIAA1549Q9HCM3 1950 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 FNDC1Q4ZHG4 1894 aaPredicted RBP6.4□□□□□ -1.38
VTI1A-201ENST00000393077 MPDU1O75352 247 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 Q1RN00 199 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 PRELID3AQ96N28 172 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF256Q9Y2P7 627 aaPredicted RBP6.4□□□□□ -1.38
VTI1A-201ENST00000393077 APC2O95996 2303 aa6.4□□□□□ -1.38
VTI1A-201ENST00000393077 hCG_38984A0A1B0GV85 526 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 FAM90A26D6RGX4 464 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 APOHP02749 345 aaPredicted RBP6.4□□□□□ -1.39
VTI1A-201ENST00000393077 CFHR2P36980 270 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 PRSS12P56730 875 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 NMSQ5H8A3 153 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 SCGB1D4Q6XE38 83 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 RNF144BQ7Z419 303 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 YRDCQ86U90 279 aaKnown RBP6.4□□□□□ -1.39
VTI1A-201ENST00000393077 SLC22A18ASQ8N1D0 253 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 HSD17B10Q99714 261 aaKnown RBP6.4□□□□□ -1.39
VTI1A-201ENST00000393077 PRDM6Q9NQX0 595 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 ANAPC10Q9UM13 185 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 A0A1B0GX78 115 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 M0QXV9 152 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 GDF1P27539 372 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 UBE2L3P68036 154 aaKnown RBP6.4□□□□□ -1.39
VTI1A-201ENST00000393077 ARL16Q0P5N6 197 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 RHBDD2Q6NTF9 364 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 INO80CQ6PI98 192 aaPredicted RBP6.4□□□□□ -1.39
VTI1A-201ENST00000393077 TMEM178AQ8NBL3 297 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms