RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 FLVCR1-AS1Q8TAF5 88 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 NRXN2Q9P2S2 1712 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 LYZL4Q96KX0 146 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 IGKV1D-8A0A087WSZ0 117 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 CYB5R2Q6BCY4 276 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 EEF1AKMT3Q96AZ1 226 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
LCA5-202ENST00000392959 ZNF236Q9UL36 1845 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 C1QTNF9BB2RNN3 333 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 C1QTNF9P0C862 333 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 CCL20P78556 96 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
LCA5-202ENST00000392959 TTC9CQ8N5M4 171 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 DPM3Q9P2X0 92 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 TNS1Q9HBL0 1735 aaKnown RBP11.02□□□□□ -0.64
LCA5-202ENST00000392959 IGHV2OR16-5A0A0B4J2B6 119 aa11.02□□□□□ -0.64
LCA5-202ENST00000392959 LINC00271P0C7V0 271 aa11.02□□□□□ -0.64
LCA5-202ENST00000392959 FAM27E3Q08E93 113 aa11.02□□□□□ -0.64
LCA5-202ENST00000392959 WDR82Q6UXN9 313 aa11.02□□□□□ -0.64
LCA5-202ENST00000392959 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.64
LCA5-202ENST00000392959 DOCK10Q96BY6 2186 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 IQCF6A8MYZ5 107 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 NAPSAO96009 420 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 TSPOP30536 169 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 TNFSF10P50591 281 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 FAM159AQ6UWV7 190 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 RNASEH2CQ8TDP1 164 aaKnown RBP11.02□□□□□ -0.65
LCA5-202ENST00000392959 NRN1Q9NPD7 142 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 IZUMO1RA6ND01 250 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 SNAI2O43623 268 aa11.02□□□□□ -0.65
LCA5-202ENST00000392959 FOXD3Q9UJU5 478 aaPredicted RBP11.02□□□□□ -0.65
LCA5-202ENST00000392959 TP53BP1Q12888 1972 aaPredicted RBP11.02□□□□□ -0.65
LCA5-202ENST00000392959 DIDO1Q9BTC0 2240 aaKnown RBP11.02□□□□□ -0.65
LCA5-202ENST00000392959 A0A0A6YYD4 124 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 CD55P08174 381 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 SP9P0CG40 484 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 ZNF56Q15929 161 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 HIGD1CA8MV81 97 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 FAM90A1Q86YD7 464 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 MRPS18CQ9Y3D5 142 aaKnown RBP11.01□□□□□ -0.65
LCA5-202ENST00000392959 SCN8AQ9UQD0 1980 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 CD5P06127 495 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 MEF2CQ06413 473 aaPredicted RBP11.01□□□□□ -0.65
LCA5-202ENST00000392959 RRN3P1Q2M238 152 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 Q6AWC8 147 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 DOCK4Q8N1I0 1966 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 CIARTQ8N365 385 aaPredicted RBP11.01□□□□□ -0.65
LCA5-202ENST00000392959 NEUROG1Q92886 237 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 MRPL20Q9BYC9 149 aaKnown RBP11.01□□□□□ -0.65
LCA5-202ENST00000392959 ELOVL5Q9NYP7 299 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 FOXA2Q9Y261 457 aaPredicted RBP11.01□□□□□ -0.65
LCA5-202ENST00000392959 MPDZO75970 2070 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 CASP8AP2Q9UKL3 1982 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 RBBP6Q7Z6E9 1792 aaKnown RBP11.01□□□□□ -0.65
LCA5-202ENST00000392959 IGLV3-32A0A0A0MS00 114 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 ATP5LO75964 103 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 SCGB1A1P11684 91 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 IGHV1-2P23083 117 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 LY6EQ16553 131 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 TCF23Q7RTU1 214 aa11.01□□□□□ -0.65
LCA5-202ENST00000392959 CHD5Q8TDI0 1954 aa11□□□□□ -0.65
LCA5-202ENST00000392959 UBE2CO00762 179 aa11□□□□□ -0.65
LCA5-202ENST00000392959 UBE2L6O14933 153 aa11□□□□□ -0.65
LCA5-202ENST00000392959 APOBEC3AP31941 199 aaPredicted RBP11□□□□□ -0.65
LCA5-202ENST00000392959 HEPN1Q6WQI6 88 aa11□□□□□ -0.65
LCA5-202ENST00000392959 LHFPL1Q86WI0 220 aa11□□□□□ -0.65
LCA5-202ENST00000392959 NIT1Q86X76 327 aa11□□□□□ -0.65
LCA5-202ENST00000392959 FMC1Q96HJ9 113 aa11□□□□□ -0.65
LCA5-202ENST00000392959 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
LCA5-202ENST00000392959 C21orf62Q9NYP8 219 aa11□□□□□ -0.65
LCA5-202ENST00000392959 S4R3C0 116 aa11□□□□□ -0.65
LCA5-202ENST00000392959 PKDREJQ9NTG1 2253 aa11□□□□□ -0.65
LCA5-202ENST00000392959 UMODP07911 640 aa11□□□□□ -0.65
LCA5-202ENST00000392959 CELA3BP08861 270 aa11□□□□□ -0.65
LCA5-202ENST00000392959 MST1P26927 711 aa11□□□□□ -0.65
LCA5-202ENST00000392959 RNASE7Q9H1E1 156 aaKnown RBP11□□□□□ -0.65
LCA5-202ENST00000392959 WFDC1Q9HC57 220 aa11□□□□□ -0.65
LCA5-202ENST00000392959 LAMTOR2Q9Y2Q5 125 aa11□□□□□ -0.65
LCA5-202ENST00000392959 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
LCA5-202ENST00000392959 MUC21A0A0G2JKD1 596 aa11□□□□□ -0.65
LCA5-202ENST00000392959 MUC21A0A140T8X8 626 aa11□□□□□ -0.65
LCA5-202ENST00000392959 M0R381 172 aa11□□□□□ -0.65
LCA5-202ENST00000392959 MUC21Q5SSG8 566 aa11□□□□□ -0.65
LCA5-202ENST00000392959 TMEM170BQ5T4T1 132 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms