RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 MC5RP33032 325 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 RHOBP62745 196 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 GAMTQ14353 236 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 MLANAQ16655 118 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 OR51G1Q8NGK1 321 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 RITA1Q96K30 269 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 IGKV1OR2-108A0A075B7D4 117 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 IGHV2-26A0A0B4J1V2 119 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 CGB1A6NKQ9 187 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 PDE6DO43924 150 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 ERHP84090 104 aaKnown RBP20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 PRB3Q04118 309 aaPredicted RBP20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 C10orf55Q5SWW7 151 aa20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 ZNF430Q9H8G1 570 aaPredicted RBP20.7■□□□□ 0.9
SMARCD3-203ENST00000392811 INS-IGF2F8WCM5 200 aa20.69■□□□□ 0.9
SMARCD3-203ENST00000392811 ZZEF1O43149 2961 aa20.69■□□□□ 0.9
SMARCD3-203ENST00000392811 IGHV3-72A0A0B4J1Y9 119 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 UBE2CO00762 179 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 GNB1P62873 340 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 CD69Q07108 199 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 TNFRSF14Q92956 283 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 A0A1W2PN81 502 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 SLC25A17O43808 307 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 IGHV2-5P01817 119 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 CHRNA7P36544 502 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 KIAA0141Q14154 515 aaPredicted RBP20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 C16orf82Q7Z2V1 217 aa20.68■□□□□ 0.9
SMARCD3-203ENST00000392811 RELNP78509 3460 aa20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 DLL1O00548 723 aa20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 ENSAO43768 121 aaKnown RBP20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 IGLV1-47P01700 117 aa20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 C1QTNF9P0C862 333 aa20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 GCHFRP30047 84 aa20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 WT1-ASQ06250 92 aa20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 VMA21Q3ZAQ7 101 aa20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 TPSG1Q9NRR2 321 aa20.67■□□□□ 0.9
SMARCD3-203ENST00000392811 LY6HO94772 140 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 OR10J1P30954 320 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 PRRX1P54821 245 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 HLA-DRB5Q30154 266 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 FAM210BQ96KR6 192 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 PPIAL4CA0A0B4J2A2 164 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 F6UZH7 168 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 PPIAL4GP0DN37 164 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 FABP9Q0Z7S8 132 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 NANPQ8TBE9 248 aa20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 METTL1Q9UBP6 276 aaKnown RBP20.66■□□□□ 0.9
SMARCD3-203ENST00000392811 MALRD1Q5VYJ5 2156 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 FOXH1O75593 365 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 MRGPRG-AS1Q2M3A8 158 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 CLEC7AQ9BXN2 247 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 RAB1BQ9H0U4 201 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 NBASA2RRP1 2371 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 ACTL6BO94805 426 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 NDUFB4O95168 129 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 VENTXO95231 258 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 LGALS7P47929 136 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 FAM78BQ5VT40 261 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 SLC16A13Q7RTY0 426 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 OR4P4Q8NGL7 312 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 TXNDC17Q9BRA2 123 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 DERL1Q9BUN8 251 aa20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 YTHDF2Q9Y5A9 579 aaKnown RBP20.65■□□□□ 0.9
SMARCD3-203ENST00000392811 AP4M1O00189 453 aa20.64■□□□□ 0.89
SMARCD3-203ENST00000392811 GATA2P23769 480 aaPredicted RBP20.64■□□□□ 0.89
SMARCD3-203ENST00000392811 LY6DQ14210 128 aa20.64■□□□□ 0.89
SMARCD3-203ENST00000392811 MIR17HGQ75NE6 70 aa20.64■□□□□ 0.89
SMARCD3-203ENST00000392811 OR8B3Q8NGG8 313 aa20.64■□□□□ 0.89
SMARCD3-203ENST00000392811 CACNG8Q8WXS5 425 aa20.64■□□□□ 0.89
SMARCD3-203ENST00000392811 OR8B2Q96RD0 313 aa20.64■□□□□ 0.89
SMARCD3-203ENST00000392811 ABCA4P78363 2273 aa20.64■□□□□ 0.89
SMARCD3-203ENST00000392811 GPX4P36969 197 aaPredicted RBP20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 OR2T6Q8NHC8 308 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 C8orf46Q8TAG6 207 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 SLC35E1Q96K37 410 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 CBLN4Q9NTU7 201 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 TRBV24-1A0A075B6N3 115 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 BUB1B-PAK6H3BSN5 160 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 RBP4P02753 201 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 COX7A1P24310 79 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 FUT9Q9Y231 359 aa20.63■□□□□ 0.89
SMARCD3-203ENST00000392811 H7BYZ3 331 aa20.62■□□□□ 0.89
SMARCD3-203ENST00000392811 BEND2Q8NDZ0 799 aa20.62■□□□□ 0.89
SMARCD3-203ENST00000392811 MIOXQ9UGB7 285 aa20.62■□□□□ 0.89
SMARCD3-203ENST00000392811 TPRP12270 2363 aaKnown RBP20.62■□□□□ 0.89
SMARCD3-203ENST00000392811 ZNF98A6NK75 572 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 CLN5O75503 358 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 TRGC2P03986 189 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 C11orf71Q6IPW1 123 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 ACY3Q96HD9 319 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 DOK5Q9P104 306 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 IGHV1-3A0A0C4DH29 117 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 A0A1W2PPI3 338 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 PFN1P07737 140 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 NECAP1Q8NC96 275 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 INSIG2Q9Y5U4 225 aa20.61■□□□□ 0.89
SMARCD3-203ENST00000392811 MT-CO2P00403 227 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 SOD3P08294 240 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 CNTFRP26992 372 aa20.6■□□□□ 0.89
SMARCD3-203ENST00000392811 LINC01551Q86U37 167 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms