RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 OR8A1Q8NGG7 326 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 FAM90A9PA6NNJ1 464 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 MT-ND6P03923 174 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 CD81P60033 236 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 COTL1Q14019 142 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 MARVELD3Q96A59 401 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 C21orf62Q9NYP8 219 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 SMIM6P0DI80 62 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 G0S2P27469 103 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 ZNF383Q8NA42 475 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 ALPK2Q86TB3 2170 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 SCO2A0A1W2PP80 73 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 PRSS33Q8NF86 280 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 SRSF12Q8WXF0 261 aaKnown RBP13.74□□□□□ -0.21
SCN3B-202ENST00000392770 TRAV20A0A0B4J274 112 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 TMEM250H0YL14 139 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 SRP19P09132 144 aaKnown RBP13.74□□□□□ -0.21
SCN3B-202ENST00000392770 ATP5G3P48201 142 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 CX3CL1P78423 397 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 PIP4P1Q86T03 277 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 FAM169BQ8N8A8 192 aa13.74□□□□□ -0.21
SCN3B-202ENST00000392770 CARHSP1Q9Y2V2 147 aaKnown RBP13.74□□□□□ -0.21
SCN3B-202ENST00000392770 GPR183P32249 361 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 GPX4P36969 197 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-202ENST00000392770 CA7P43166 264 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 DTX1Q86Y01 620 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 A8MXK9 166 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 ZNF207O43670 478 aaKnown RBP13.73□□□□□ -0.21
SCN3B-202ENST00000392770 TGFAP01135 160 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 ASCL4Q6XD76 172 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 RPUSD1Q9UJJ7 312 aaKnown RBP13.73□□□□□ -0.21
SCN3B-202ENST00000392770 TRBV6-6A0A0A6YYG2 114 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 RPRMLQ8N4K4 120 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 SLC25A33Q9BSK2 321 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 IGHV2-26A0A0B4J1V2 119 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 ICAM4Q14773 271 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 TEX45Q8NA69 505 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 IGKV1D-17A0A075B6S4 117 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 ANOS1P23352 680 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 PRCDQ00LT1 54 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 DOCK9Q9BZ29 2069 aa13.73□□□□□ -0.21
SCN3B-202ENST00000392770 C21orf62-AS1Q17RA5 79 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 SDK2Q58EX2 2172 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 IGHV3-49A0A0A0MS15 119 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 TIMM23O14925 209 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 DUX5Q96PT3 197 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 OBSL1O75147 1896 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 NBEAP1P0C6P0 100 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 CFPP27918 469 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 Q6ZN92 141 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 HIST1H2BAQ96A08 127 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 COQ2Q96H96 371 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 ELOVL1Q9BW60 279 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 HLA-DQA1P01909 254 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 IGHV1-8P0DP01 117 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 VAMP3Q15836 100 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 IGFL3Q6UXB1 125 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 OR4B1Q8NGF8 309 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 MAP1BP46821 2468 aaKnown RBP13.72□□□□□ -0.21
SCN3B-202ENST00000392770 EP400Q96L91 3159 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 OR52E5Q8NH55 327 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 NEUROG1Q92886 237 aa13.72□□□□□ -0.21
SCN3B-202ENST00000392770 RPS20P60866 119 aaKnown RBP13.71□□□□□ -0.21
SCN3B-202ENST00000392770 TNFRSF14Q92956 283 aa13.71□□□□□ -0.21
SCN3B-202ENST00000392770 SRSF3P84103 164 aaKnown RBP13.71□□□□□ -0.21
SCN3B-202ENST00000392770 VMO1Q7Z5L0 202 aa13.71□□□□□ -0.21
SCN3B-202ENST00000392770 TMEM144Q7Z5S9 345 aa13.71□□□□□ -0.21
SCN3B-202ENST00000392770 MYOZ3Q8TDC0 251 aa13.71□□□□□ -0.21
SCN3B-202ENST00000392770 VENTXO95231 258 aa13.71□□□□□ -0.21
SCN3B-202ENST00000392770 VN1R17PQ8TDU5 208 aa13.71□□□□□ -0.21
SCN3B-202ENST00000392770 DPRXA6NFQ7 191 aa13.71□□□□□ -0.22
SCN3B-202ENST00000392770 HLA-DRB1P01911 266 aa13.71□□□□□ -0.22
SCN3B-202ENST00000392770 FOXI3A8MTJ6 420 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-202ENST00000392770 ADIPOQQ15848 244 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 C20orf204Q6ZNR8 217 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 OR1P1Q8NH06 330 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 BET1LQ9NYM9 111 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 CACNA1EQ15878 2313 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 CD99P14209 185 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 Q1RN00 199 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 SYT8Q8NBV8 401 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 ZNF503-AS2A6NEH8 195 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 DGAT2L7PQ6IED9 249 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 RP1L1Q8IWN7 2480 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-202ENST00000392770 GPX1P07203 203 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 EFNA4P52798 201 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 HEPN1Q6WQI6 88 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 IGHV3OR16-8A0A075B7F1 116 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 RNF224P0DH78 156 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 OR10W1Q8NGF6 305 aa13.7□□□□□ -0.22
SCN3B-202ENST00000392770 PEX7O00628 323 aa13.69□□□□□ -0.22
SCN3B-202ENST00000392770 ZMAT5Q9UDW3 170 aaKnown RBP13.69□□□□□ -0.22
SCN3B-202ENST00000392770 CKS2P33552 79 aa13.69□□□□□ -0.22
SCN3B-202ENST00000392770 GCGP01275 180 aa13.69□□□□□ -0.22
SCN3B-202ENST00000392770 DMRTA2Q96SC8 542 aa13.69□□□□□ -0.22
SCN3B-202ENST00000392770 KLRD1Q13241 179 aa13.69□□□□□ -0.22
SCN3B-202ENST00000392770 NBL1P41271 181 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms