RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TBC1D26Q86UD7 250 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 BSCL2Q96G97 398 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-208ENST00000392449 FUNDC2Q9BWH2 189 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 VCX3AQ9NNX9 186 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 C15orf61A6NNL5 157 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 CYB5BO43169 146 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 HPGDSO60760 199 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 TNFAIP8O95379 198 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 IGHV3-48P01763 117 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 ELK1P19419 428 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-208ENST00000392449 TSPAN5P62079 268 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 IZUMO4Q1ZYL8 232 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 ANKRD55Q3KP44 614 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 Q56UQ5 140 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 OR2C3Q8N628 320 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 C5orf66Q9H5L9 145 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 DAZ1Q9NQZ3 744 aaKnown RBP12.34□□□□□ -0.43
PTPRK-208ENST00000392449 TMEM14BQ9NUH8 114 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 PRNDQ9UKY0 176 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 TRAV25A0A0B4J276 109 aa12.33□□□□□ -0.44
PTPRK-208ENST00000392449 M0QYG6 137 aa12.33□□□□□ -0.44
PTPRK-208ENST00000392449 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTPRK-208ENST00000392449 ODF3L2Q3SX64 289 aa12.33□□□□□ -0.44
PTPRK-208ENST00000392449 MRGPRFQ96AM1 343 aa12.33□□□□□ -0.44
PTPRK-208ENST00000392449 SEC22AQ96IW7 307 aa12.33□□□□□ -0.44
PTPRK-208ENST00000392449 IGHV3-49A0A0A0MS15 119 aa12.32□□□□□ -0.44
PTPRK-208ENST00000392449 NDUFA4O00483 81 aa12.32□□□□□ -0.44
PTPRK-208ENST00000392449 APOA1P02647 267 aa12.32□□□□□ -0.44
PTPRK-208ENST00000392449 SPINK9Q5DT21 86 aa12.32□□□□□ -0.44
PTPRK-208ENST00000392449 OR5B3Q8NH48 314 aa12.32□□□□□ -0.44
PTPRK-208ENST00000392449 MISP3Q96FF7 219 aa12.32□□□□□ -0.44
PTPRK-208ENST00000392449 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-208ENST00000392449 NAA50Q9GZZ1 169 aaKnown RBP12.32□□□□□ -0.44
PTPRK-208ENST00000392449 TSPAN4O14817 238 aa12.31□□□□□ -0.44
PTPRK-208ENST00000392449 CTSGP08311 255 aa12.31□□□□□ -0.44
PTPRK-208ENST00000392449 PI3P19957 117 aa12.31□□□□□ -0.44
PTPRK-208ENST00000392449 RCVRNP35243 200 aa12.31□□□□□ -0.44
PTPRK-208ENST00000392449 SPSB3Q6PJ21 355 aa12.31□□□□□ -0.44
PTPRK-208ENST00000392449 IL17DQ8TAD2 202 aa12.31□□□□□ -0.44
PTPRK-208ENST00000392449 TMEM56Q96MV1 263 aa12.31□□□□□ -0.44
PTPRK-208ENST00000392449 BIRC6Q9NR09 4857 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 SMIM31A0A1B0GVY4 71 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 JTBO76095 146 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 DEFB135Q30KP9 77 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 H2BFWTQ7Z2G1 175 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 SLC38A6Q8IZM9 456 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 CADM3Q8N126 398 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 OR1P1Q8NH06 330 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 SCPEP1Q9HB40 452 aa12.3□□□□□ -0.44
PTPRK-208ENST00000392449 IGHV3OR16-13A0A075B7E8 117 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 IGHV3-74A0A0B4J1X5 117 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 A0A0J9YWU9 116 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 I3L2K1 104 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-208ENST00000392449 RPL35AP18077 110 aaKnown RBP12.29□□□□□ -0.44
PTPRK-208ENST00000392449 PMS2P11Q13670 270 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 ZNF124Q15973 351 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 OR4A16Q8NH70 328 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 RNF2Q99496 336 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 TSC22D3Q99576 134 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 FKBP11Q9NYL4 201 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 KLK11Q9UBX7 282 aa12.29□□□□□ -0.44
PTPRK-208ENST00000392449 IGKV3-7A0A075B6H7 116 aa12.28□□□□□ -0.44
PTPRK-208ENST00000392449 YIF1AO95070 293 aa12.28□□□□□ -0.44
PTPRK-208ENST00000392449 MT-CO2P00403 227 aa12.28□□□□□ -0.44
PTPRK-208ENST00000392449 TFPI2P48307 235 aa12.28□□□□□ -0.44
PTPRK-208ENST00000392449 PRCDQ00LT1 54 aa12.28□□□□□ -0.44
PTPRK-208ENST00000392449 LPCAT3Q6P1A2 487 aa12.28□□□□□ -0.44
PTPRK-208ENST00000392449 APRG1Q8IVJ8 170 aa12.28□□□□□ -0.44
PTPRK-208ENST00000392449 PINX1Q96BK5 328 aaKnown RBP12.28□□□□□ -0.44
PTPRK-208ENST00000392449 C15orf62A8K5M9 175 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 FAM25AB3EWG3 89 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 FAM25CB3EWG5 89 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 FAM25GB3EWG6 89 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 K7EMT4 169 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 IGKV1-5P01602 117 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 S100GP29377 79 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 UCP3P55916 312 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 LAMTOR1Q6IAA8 161 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 CMTM3Q96MX0 182 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 TP53RKQ96S44 253 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 FAM212BQ9NTI7 297 aaPredicted RBP12.27□□□□□ -0.44
PTPRK-208ENST00000392449 SMPXQ9UHP9 88 aa12.27□□□□□ -0.44
PTPRK-208ENST00000392449 IGHV7-4-1A0A0J9YVY3 117 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 CHEK1O14757 476 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
PTPRK-208ENST00000392449 SPRY2O43597 315 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 CD3DP04234 171 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 PGAM2P15259 253 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 RORCP51449 518 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 APOC4P55056 127 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 LYG2Q86SG7 212 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 OR4D10Q8NGI6 311 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 OR52I2Q8NH67 350 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 ATP6V0BQ99437 205 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 RHPN1-AS1Q9BWJ2 59 aa12.27□□□□□ -0.45
PTPRK-208ENST00000392449 CXorf65A6NEN9 183 aa12.26□□□□□ -0.45
PTPRK-208ENST00000392449 OR4C46A6NHA9 309 aa12.26□□□□□ -0.45
PTPRK-208ENST00000392449 SMIM18P0DKX4 95 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms