RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 APH1AQ96BI3 265 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 RBMXL1Q96E39 390 aaKnown RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 DYNLL2Q96FJ2 89 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 DNAJC30Q96LL9 226 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ZFP3Q96NJ6 502 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TRIB3Q96RU7 358 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 LYSMD1Q96S90 227 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TBX5Q99593 518 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 SCRT1Q9BWW7 348 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ULBP2Q9BZM5 246 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 C20orf27Q9GZN8 174 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 OR51I1Q9H343 314 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM27Q9HBJ8 222 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 CYTL1Q9NRR1 136 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 HEBP1Q9NRV9 189 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 CBLN4Q9NTU7 201 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 SLC23A2Q9UGH3 650 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 NXT1Q9UKK6 140 aaKnown RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 FLVCR2Q9UPI3 526 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 FARSAQ9Y285 508 aaKnown RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 BTRCQ9Y297 605 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 LSM2Q9Y333 95 aaKnown RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 RFNGQ9Y644 331 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ENPP4Q9Y6X5 453 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 KMT2EQ8IZD2 1858 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 GBF1Q92538 1859 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TECPR2O15040 1411 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 LOC285556D6RIA3 1793 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 COL11A1P12107 1806 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 NYNRINQ9P2P1 1898 aaKnown RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 SMIM26A0A096LP01 95 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TRAV19A0A0A6YYK7 116 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 LOC100130705A0A1B0GUX0 176 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 NAP1L6A6NFF2 107 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 SMIM9A6NGZ8 99 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 FAM183AA6NL82 134 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 H0Y980 276 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 H0YJW9 148 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF593O00488 134 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 RFXANKO14593 260 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 CDC42EP2O14613 210 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 RTL8CO15255 209 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 PDE6DO43924 150 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 IGLC1P0CG04 106 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 HIST1H1EP10412 219 aaKnown RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 HIST1H1DP16402 221 aaKnown RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GABRG2P18507 467 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ATF1P18846 271 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ALOX5APP20292 161 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 CSRP1P21291 193 aaKnown RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GADD45AP24522 165 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 OR10J1P30954 320 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 PYCR1P32322 319 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GABRA3P34903 492 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 CFHR2P36980 270 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 OPRK1P41145 380 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GPR1P46091 355 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 CXCL12P48061 93 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 DNASE1L1P49184 302 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 SULT1A1P50225 295 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF140P52738 457 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 NDUFA6P56556 154 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 RAB38P57729 211 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TAS2R43P59537 309 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TAS2R31P59538 309 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TAS2R20P59543 309 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 RPS25P62851 125 aaKnown RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 RPS28P62857 69 aaKnown RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GNG3P63215 75 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 BTG2P78543 158 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 CRADDP78560 199 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 PLCXD2Q0VAA5 305 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 MLLT11Q13015 90 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 HTR4Q13639 388 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 MOBPQ13875 183 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 RBMY1FQ15415 496 aaKnown RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 IAH1Q2TAA2 248 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 MPV17L2Q567V2 206 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM97Q5BJF2 176 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM128Q5BJH2 165 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 FAM162BQ5T6X4 162 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ZFAND6Q6FIF0 208 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ALKAL2Q6UX46 152 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 IGFL3Q6UXB1 125 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 Q6ZS92 163 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 COMMD6Q7Z4G1 85 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ST6GALNAC3Q8NDV1 305 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GPR32P1Q8NGA4 272 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 OR1J4Q8NGS1 313 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 CIRBP-AS1Q8TBR5 109 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF675Q8TD23 568 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 OR8D1Q8WZ84 308 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM106AQ96A25 262 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 RERGQ96A58 199 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 CPNE2Q96FN4 548 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 PEBP4Q96S96 227 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GPR21Q99679 349 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 SPIN2AQ99865 258 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms