RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 ODAMA1E959 279 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 ZNF879B4DU55 563 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CCL16O15467 120 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 NUPR1O60356 82 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 MIFP14174 115 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 MAGEA2P43356 314 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 HAAOP46952 286 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 EIF2B2P49770 351 aaKnown RBP-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PSMD7P51665 324 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 GNA13Q14344 377 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CLEC12BQ2HXU8 276 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 AHSA2Q719I0 299 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 Q86TA4 180 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CDRT4Q8N9R6 151 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 LRRC45Q96CN5 670 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 FAM210AQ96ND0 272 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 ERMAPQ96PL5 475 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 NXT1Q9UKK6 140 aaKnown RBP-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 STARD9Q9P2P6 4700 aa-1.6□□□□□ -2.67
RNU6-1009P-201ENST00000390996 USP9YO00507 2555 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 HYDINQ4G0P3 5121 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TMED7-TICAM2A0A0A6YYA0 188 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TRAV12-1A0A0B4J245 112 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 ZNF727A8MUV8 499 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TIMM17BO60830 172 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 LYZL6O75951 148 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 UBL3O95164 117 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CFDP00746 253 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 ATP5G1P05496 136 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CTSDP07339 412 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SPI1P17947 270 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 H2BFSP57053 126 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 EXOC3L4Q17RC7 722 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 RNASE10Q5GAN6 216 aaKnown RBP-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SPANXN5Q5MJ07 72 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 Q6ZQT0 140 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 C11orf40Q8WZ69 217 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 RAB1BQ9H0U4 201 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 WDR54Q9H977 334 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 RNF11Q9Y3C5 154 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CNOT1A5YKK6 2376 aaKnown RBP-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CCDC88AQ3V6T2 1871 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 RYR3Q15413 4870 aa-1.61□□□□□ -2.67
RNU6-1009P-201ENST00000390996 GPR31O00270 319 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SNAP29O95721 258 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 IGHV3-7P01780 117 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SPRR2BP35325 72 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 UBE2KP61086 200 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SAPCD1Q5SSQ6 148 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SSX8Q7RTT4 187 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TMEM147Q9BVK8 224 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PSTPIP2Q9H939 334 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 C14orf105Q9NVL8 296 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PRELID1Q9Y255 219 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SPTBN2O15020 2390 aa-1.62□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PLXNA4Q9HCM2 1894 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 BCL9O00512 1426 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 F5H5K5 113 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 COX7A2LO14548 114 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 LY6G6CO95867 125 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 LIMS3P0CW19 117 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 LIMS4P0CW20 117 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 MIPP30301 263 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 FABP5Q01469 135 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 FLOT2Q14254 428 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 VAMP3Q15836 100 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 ZCCHC23Q6ZST2 131 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 ANKRD7Q92527 254 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TMEM106AQ96A25 262 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 MUCL1Q96DR8 90 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TMEM56Q96MV1 263 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CCL13Q99616 98 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PRRG3Q9BZD7 231 aa-1.63□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SULT1B1O43704 296 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TCL1BO95988 128 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 HTR1AP08908 422 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 BAALC-AS2P0C853 105 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CD151P48509 253 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 HPCAP84074 193 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 Q6ZQY7 126 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PDCL2Q8N4E4 241 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TMEM251Q8N6I4 163 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 TMEM109Q9BVC6 243 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 HDGFL3Q9Y3E1 203 aa-1.64□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PKHD1P08F94 4074 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 RPS4Y1P22090 263 aaKnown RBP-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 CSN1S1P47710 185 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 STK38Q15208 465 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SPATA45Q537H7 98 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 DEFB128Q7Z7B8 93 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PLEKHB2Q96CS7 222 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 GNPNAT1Q96EK6 184 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 ULBP3Q9BZM4 244 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PARVAQ9NVD7 372 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 PIK3R4Q99570 1358 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 SVEP1Q4LDE5 3571 aa-1.65□□□□□ -2.67
RNU6-1009P-201ENST00000390996 ITPR3Q14573 2671 aa-1.66□□□□□ -2.67
RNU6-1009P-201ENST00000390996 YEATS4O95619 227 aa-1.66□□□□□ -2.68
RNU6-1009P-201ENST00000390996 NQO2P16083 231 aa-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms