RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 Q8N6K4 173 aa0.48□□□□□ -2.33
SNORA40.4-201ENST00000390971 MCFD2Q8NI22 146 aa0.48□□□□□ -2.33
SNORA40.4-201ENST00000390971 CMTM5Q96DZ9 223 aa0.48□□□□□ -2.33
SNORA40.4-201ENST00000390971 CNBD2Q96M20 576 aa0.48□□□□□ -2.33
SNORA40.4-201ENST00000390971 DCCP43146 1447 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 OR1I1O60431 355 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 UCHL3P15374 230 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 RPL12P30050 165 aaKnown RBP0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 UBE2G2P60604 165 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 PDE6HQ13956 83 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 KISS1Q15726 138 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 COQ5Q5HYK3 327 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 SPANXN5Q5MJ07 72 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 GDF5OSQ5U4N7 250 aa0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 IMP3Q9NV31 184 aaKnown RBP0.47□□□□□ -2.33
SNORA40.4-201ENST00000390971 ABCC11Q96J66 1382 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 TRBV20OR9-2A0A075B6H5 130 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 A0A0J9YY10 115 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 A0A1B0GX78 115 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 C2orf70A6NJV1 201 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 M0R2N4 97 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 C8orf88P0DMB2 117 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 MARCKSL1P49006 195 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 RAB4BP61018 213 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 IFITM2Q01629 132 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 SCGB3A1Q96QR1 104 aa0.46□□□□□ -2.34
SNORA40.4-201ENST00000390971 MAST2Q6P0Q8 1798 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 CTSDP07339 412 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 GRK1Q15835 563 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 C1orf195Q5TG92 126 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 AADACL3Q5VUY0 350 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 Q6ZQT0 140 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 OOSP2Q86WS3 158 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 PFN4Q8NHR9 129 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 AMELYQ99218 206 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 CISHQ9NSE2 258 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 C3orf18Q9UK00 162 aa0.45□□□□□ -2.34
SNORA40.4-201ENST00000390971 CLDN25C9JDP6 229 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 APOEP02649 317 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 SPI1P17947 270 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 MED21Q13503 144 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 KCNJ8Q15842 424 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 SPANXN3Q5MJ09 141 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 OR2T4Q8NH00 348 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 DERL1Q9BUN8 251 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 ADGRB2O60241 1585 aa0.44□□□□□ -2.34
SNORA40.4-201ENST00000390971 A0A1B0GV50 99 aa0.43□□□□□ -2.34
SNORA40.4-201ENST00000390971 FAM25EA8MYX2 175 aa0.43□□□□□ -2.34
SNORA40.4-201ENST00000390971 MLLT11Q13015 90 aaPredicted RBP0.43□□□□□ -2.34
SNORA40.4-201ENST00000390971 GUK1Q16774 197 aa0.43□□□□□ -2.34
SNORA40.4-201ENST00000390971 IQCF2Q8IXL9 164 aa0.43□□□□□ -2.34
SNORA40.4-201ENST00000390971 WDR61Q9GZS3 305 aaKnown RBP0.43□□□□□ -2.34
SNORA40.4-201ENST00000390971 RIC1Q4ADV7 1423 aa0.43□□□□□ -2.34
SNORA40.4-201ENST00000390971 CNTRLQ7Z7A1 2325 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 ACOX3O15254 700 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST1H2BOP23527 126 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST1H2BBP33778 126 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST1H2BDP58876 126 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST1H2BCP62807 126 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 SKP1P63208 163 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST2H2BEQ16778 126 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST1H2BHQ93079 126 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST1H2BNQ99877 126 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 HIST1H2BMQ99879 126 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 GINS4Q9BRT9 223 aa0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 UPF3BQ9BZI7 483 aaKnown RBP0.42□□□□□ -2.34
SNORA40.4-201ENST00000390971 CRYGAP11844 174 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 MIFP14174 115 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 NAA20P61599 178 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 CLVS2Q5SYC1 327 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 RPL22L1Q6P5R6 122 aaKnown RBP0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 LRRN1Q6UXK5 716 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 Q6ZS49 121 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 FAM9CQ8IZT9 166 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 OR4E2Q8NGC2 313 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 PIGXQ8TBF5 258 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 TOPBP1Q92547 1522 aa0.41□□□□□ -2.34
SNORA40.4-201ENST00000390971 CXCR6O00574 342 aa0.4□□□□□ -2.35
SNORA40.4-201ENST00000390971 INE1O15225 51 aa0.4□□□□□ -2.35
SNORA40.4-201ENST00000390971 COX5BP10606 129 aa0.4□□□□□ -2.35
SNORA40.4-201ENST00000390971 BLVRAP53004 296 aa0.4□□□□□ -2.35
SNORA40.4-201ENST00000390971 DPPA3Q6W0C5 159 aa0.4□□□□□ -2.35
SNORA40.4-201ENST00000390971 MRPL30Q8TCC3 161 aaKnown RBP0.4□□□□□ -2.35
SNORA40.4-201ENST00000390971 ATP6V1G3Q96LB4 118 aa0.4□□□□□ -2.35
SNORA40.4-201ENST00000390971 ULBP3Q9BZM4 244 aa0.4□□□□□ -2.35
SNORA40.4-201ENST00000390971 RALGAPA2Q2PPJ7 1873 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 TRAV1-1A0A0B4J248 108 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 A0A0D9SG52 128 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 A0A1W2PPM0 123 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 INMT-MINDY4F8WBC2 141 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 COX6A1P12074 109 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 CASQ1P31415 396 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 RHOGP84095 191 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 MIXL1Q9H2W2 232 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 EML5Q05BV3 1969 aa0.39□□□□□ -2.35
SNORA40.4-201ENST00000390971 CCDC88AQ3V6T2 1871 aa0.38□□□□□ -2.35
SNORA40.4-201ENST00000390971 TRBV6-8A0A0A6YYG3 113 aa0.38□□□□□ -2.35
SNORA40.4-201ENST00000390971 EVPLLA8MZ36 301 aa0.38□□□□□ -2.35
SNORA40.4-201ENST00000390971 IGKV1-5P01602 117 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms