RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 RPRMLQ8N4K4 120 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 KLHDC1Q8N7A1 406 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 SARAFQ96BY9 339 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 MGST2Q99735 147 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 MS4A5Q9H3V2 200 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 IGHV2OR16-5A0A0B4J2B6 119 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 TMEM30CPA0ZSE6 113 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 MSMPQ1L6U9 139 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 ACP7Q6ZNF0 438 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 TSKUQ8WUA8 353 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 GNB1LQ9BYB4 327 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 FAM234AQ9H0X4 552 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 SERTAD4Q9NUC0 356 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 DMXL2Q8TDJ6 3036 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 IGHV1-18A0A0C4DH31 117 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 PRR33A8MZF0 331 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 ACTL6BO94805 426 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 TOMM40O96008 361 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 CA1P00915 261 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 ZNF718Q3SXZ3 478 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 STUMQ69YW2 141 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 PQLC2Q6ZP29 291 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 TMEM136Q6ZRR5 245 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 SEM1Q6ZVN7 128 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 RAB1CQ92928 201 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 DUSP13Q9UII6 198 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 LINC00473A8K010 186 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 BMPR1BO00238 502 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 GCHFRP30047 84 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 CXXC4Q9H2H0 198 aa14.57□□□□□ -0.08
SQSTM1-202ENST00000389805 SPRNQ5BIV9 151 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 VKORC1L1Q8N0U8 176 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 OR13A1Q8NGR1 328 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 CGAP01215 116 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 IGHV3-13P01766 116 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 IGHV3-7P01780 117 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 OR9G9P0C7N8 305 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 EDDM3AQ14507 147 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 AARDQ4LEZ3 155 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 CENPWQ5EE01 88 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 ABHD12Q8N2K0 398 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 OR4P4Q8NGL7 312 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 GGTLC1Q9BX51 225 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 ZNF71Q9NQZ8 489 aaPredicted RBP14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 PLSCR4Q9NRQ2 329 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 ZNF318Q5VUA4 2279 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 ROS1P08922 2347 aa14.56□□□□□ -0.08
SQSTM1-202ENST00000389805 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 CRYBB3P26998 211 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 CATR1Q13166 79 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 OR2Z1Q8NG97 314 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 HEYLQ9NQ87 328 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 TNFSF4P23510 183 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 LDLRAD2Q5SZI1 272 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 PIEZO2Q9H5I5 2752 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 IGHV2-70DA0A0C4DH43 119 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 MGST1P10620 155 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 GNG4P50150 75 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 CD177Q8N6Q3 437 aa14.55□□□□□ -0.08
SQSTM1-202ENST00000389805 ADGRG4Q8IZF6 3080 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 TRAV9-1A0A075B6T8 112 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 RAB29O14966 203 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 IGLL1P15814 213 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 OR10J3Q5JRS4 329 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 NHLRC2Q8NBF2 726 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 LRRC29Q8WV35 223 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 CDC42EP3Q9UKI2 254 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 PLCE1Q9P212 2302 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 CX3CL1P78423 397 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 VHLLQ6RSH7 139 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 PROCRQ9UNN8 238 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 HCFC1P51610 2035 aa14.54□□□□□ -0.08
SQSTM1-202ENST00000389805 HELTA6NFD8 242 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 OOEPA6NGQ2 149 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 OPRK1P41145 380 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 SLC35E4Q6ICL7 350 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 ZNF439Q8NDP4 499 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 IGHV3OR15-7A0A075B7D8 119 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 IGHV2-26A0A0B4J1V2 119 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 TNXAQ16473 311 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 BHLHA15Q7RTS1 189 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 SSBP3Q9BWW4 388 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 GCM1Q9NP62 436 aa14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 MRPS16Q9Y3D3 137 aaKnown RBP14.53□□□□□ -0.08
SQSTM1-202ENST00000389805 K7EM74 188 aa14.52□□□□□ -0.08
SQSTM1-202ENST00000389805 IGLV1-44P01699 117 aa14.52□□□□□ -0.08
SQSTM1-202ENST00000389805 SLAQ13239 276 aa14.52□□□□□ -0.08
SQSTM1-202ENST00000389805 EFNB3Q15768 340 aa14.52□□□□□ -0.08
SQSTM1-202ENST00000389805 NINJ1Q92982 152 aa14.52□□□□□ -0.08
SQSTM1-202ENST00000389805 PSG11Q9UQ72 335 aa14.52□□□□□ -0.08
SQSTM1-202ENST00000389805 TRBV9A0A0B4J1U6 114 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 WDR73Q6P4I2 378 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 TXNDC17Q9BRA2 123 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 BSNQ9UPA5 3926 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 IGLC7A0M8Q6 106 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 MMP23AO75900 390 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 PSG1P11464 419 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 TMEM249Q2WGJ8 235 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 EBLN2Q6P2I7 272 aa14.52□□□□□ -0.09
SQSTM1-202ENST00000389805 KIR3DL3Q8N743 410 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms