RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 FBXL15Q9H469 300 aa10.89□□□□□ -0.67
PTPRN2-203ENST00000389418 M0R143 59 aa10.89□□□□□ -0.67
PTPRN2-203ENST00000389418 CLPSP04118 112 aa10.89□□□□□ -0.67
PTPRN2-203ENST00000389418 Q6ZS92 163 aa10.89□□□□□ -0.67
PTPRN2-203ENST00000389418 SLC25A28Q96A46 364 aa10.89□□□□□ -0.67
PTPRN2-203ENST00000389418 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 TMEM250H0YL14 139 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 HLA-DQA1P01909 254 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 THBDP07204 575 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 SRSF7Q16629 238 aaKnown RBP eCLIP10.88□□□□□ -0.674e-7■■■■■ 29.1
PTPRN2-203ENST00000389418 MSRB2Q9Y3D2 182 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 LRRK1Q38SD2 2015 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 PCNTO95613 3336 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 DLX6P56179 175 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 VAMP3Q15836 100 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 MBNL2Q5VZF2 373 aaKnown RBP10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 OR4A47Q6IF82 309 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 C5orf24Q7Z6I8 188 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 TMEM8BA6NDV4 472 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 WISP1O95388 367 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 CA2P00918 260 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 IGHG3P01860 377 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 TRGV3P03979 118 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 RRN3P1Q2M238 152 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 ZNF385CQ66K41 422 aaPredicted RBP10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 DYSFO75923 2080 aa10.88□□□□□ -0.67
PTPRN2-203ENST00000389418 CXorf65A6NEN9 183 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 C1QTNF9BB2RNN3 333 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 C1QTNF9P0C862 333 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 IGHV3-66A0A0C4DH42 116 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 RELBQ01201 579 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 HIST1H2BAQ96A08 127 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 LINC00527Q9UJ94 153 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 SIAH2O43255 324 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 PTBP3O95758 552 aaKnown RBP10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 CYP2G1PQ6ZSU1 146 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 RARRES2Q99969 163 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 SMIM6P0DI80 62 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 ZNF497Q6ZNH5 498 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 C20orf204Q6ZNR8 217 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 TMEM133Q9H2Q1 129 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 RPRMQ9NS64 109 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 DOCK11Q5JSL3 2073 aa10.87□□□□□ -0.67
PTPRN2-203ENST00000389418 A0A1W2PRX2 142 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 MBD3L4A6NDZ8 208 aaPredicted RBP10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 MBD3L3A6NE82 208 aaPredicted RBP10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 MBD3L5A6NJ08 208 aaPredicted RBP10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 IL4P05112 153 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 MPZP25189 248 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 MBD3L2Q8NHZ7 208 aaPredicted RBP10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 C21orf62Q9NYP8 219 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 TICRRQ7Z2Z1 1910 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 IGKV1D-33P01593 117 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 IGKV1-33P01594 117 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 PPP1R27Q86WC6 154 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 OR4B1Q8NGF8 309 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 OR4X2Q8NGF9 303 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 ARPC1AQ92747 370 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 WFIKKN1Q96NZ8 548 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 NPFFR1Q9GZQ6 430 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 C17orf98A8MV24 154 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 ARL14EPLP0DKL9 152 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 GPX4P36969 197 aaPredicted RBP10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 FAM169BQ8N8A8 192 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 CLDND2Q8NHS1 167 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 USP9YO00507 2555 aaPredicted RBP10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 TRAV34A0A0B4J273 112 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 FBLL1A6NHQ2 334 aaKnown RBP10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 GCGP01275 180 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 SCGB1C2P0DMR2 95 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 GLRX5Q86SX6 157 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 NEUROG1Q92886 237 aa10.86□□□□□ -0.67
PTPRN2-203ENST00000389418 AREGP15514 252 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 NUTF2P61970 127 aaKnown RBP10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 NABP1Q96AH0 204 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 SRRM5B3KS81 715 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 IGHV3-11P01762 117 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 RPL29P47914 159 aaKnown RBP10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 TWIST1Q15672 202 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 FBXL7Q9UJT9 491 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 RNF222A6NCQ9 220 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 FAM90A9PA6NNJ1 464 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 TRGC1P0CF51 173 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 PET117Q6UWS5 81 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 MAPK1IP1LQ8NDC0 245 aa10.85□□□□□ -0.67
PTPRN2-203ENST00000389418 IGKV1D-13A0A0B4J2D9 117 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 PF4P02776 101 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 IGKV1-13P0DP09 117 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 GCHFRP30047 84 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 RNF144BQ7Z419 303 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 ST6GALNAC3Q8NDV1 305 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 MRPL20Q9BYC9 149 aaKnown RBP10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 USP9XQ93008 2570 aaPredicted RBP10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 FREM1Q5H8C1 2179 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 IGKV1D-8A0A087WSZ0 117 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 NBR2O15453 112 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 VENTXO95231 258 aa10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 PACRGQ96M98 296 aaPredicted RBP10.84□□□□□ -0.67
PTPRN2-203ENST00000389418 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms