RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 C20orf202A1L168 122 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 PPIAL4DF5H284 164 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 FCN3O75636 299 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 SAA2P0DJI9 122 aaPredicted RBP11.7□□□□□ -0.54
CLCN4-201ENST00000380829 PPIAL4FP0DN26 164 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 RNF151Q2KHN1 245 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 FAM78BQ5VT40 261 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 VKORC1L1Q8N0U8 176 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 SLC35E1Q96K37 410 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 VAMP8Q9BV40 100 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 GAL3ST2Q9H3Q3 398 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 RAB29O14966 203 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 ZG16O60844 167 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 IFNA5P01569 189 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 ADORA2A-AS1P86434 159 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 MEF2BQ02080 365 aaPredicted RBP11.7□□□□□ -0.54
CLCN4-201ENST00000380829 LY6DQ14210 128 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 TMEM183BQ1AE95 376 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 STPG4Q8N801 248 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 CMTM2Q8TAZ6 248 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 IDI2-AS1Q9NZ38 188 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 TRAPPC1Q9Y5R8 145 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 COL6A6A6NMZ7 2263 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 OR9G9P0C7N8 305 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 OR8G2PQ6IF36 304 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 LYG1Q8N1E2 194 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 ZNRD1Q9P1U0 126 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 APOBEC3AP31941 199 aaPredicted RBP11.69□□□□□ -0.54
CLCN4-201ENST00000380829 RPL15P61313 204 aaKnown RBP11.69□□□□□ -0.54
CLCN4-201ENST00000380829 RPS16P62249 146 aaKnown RBP11.69□□□□□ -0.54
CLCN4-201ENST00000380829 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 LYPD2Q6UXB3 125 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 ZNF525Q8N782 197 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 CIB3Q96Q77 187 aaPredicted RBP11.69□□□□□ -0.54
CLCN4-201ENST00000380829 S1PR3Q99500 378 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
CLCN4-201ENST00000380829 RAB9BQ9NP90 201 aa11.69□□□□□ -0.54
CLCN4-201ENST00000380829 ARFGEF3Q5TH69 2177 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 A0A0U1RQK1 487 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 ZNF320A2RRD8 509 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 SELENOTP62341 195 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 RPL31P62899 125 aaKnown RBP11.68□□□□□ -0.54
CLCN4-201ENST00000380829 C16orf54Q6UWD8 224 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 CENPVQ7Z7K6 275 aaPredicted RBP11.68□□□□□ -0.54
CLCN4-201ENST00000380829 MBD3L1Q8WWY6 194 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 OR4C12Q96R67 309 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 MS4A5Q9H3V2 200 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
CLCN4-201ENST00000380829 LRBAP50851 2863 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 hADV38S2A0JD32 116 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 TYMSP04818 313 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 CCL3L1P16619 93 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 ADMP35318 185 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 HBG1P69891 147 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 HBG2P69892 147 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 ZNF439Q8NDP4 499 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 FAM216AQ8WUB2 273 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 CORO2AQ92828 525 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 HSPB9Q9BQS6 159 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 PATZ1Q9HBE1 687 aaKnown RBP11.68□□□□□ -0.54
CLCN4-201ENST00000380829 RNF114Q9Y508 228 aa11.68□□□□□ -0.54
CLCN4-201ENST00000380829 IFNA1P01562 189 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 LINC00310P59036 64 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 FBXL19-AS1Q494R0 122 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 TMEM14EPQ6UXP3 125 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 OR4F5Q8NH21 305 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 SCGB1C1Q8TD33 95 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 DDB2Q92466 427 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 H1FXQ92522 213 aaKnown RBP11.67□□□□□ -0.54
CLCN4-201ENST00000380829 LHX4Q969G2 390 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 OR4F4Q96R69 305 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 TP53TG3Q9ULZ0 132 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 LINC00312Q9Y6C7 94 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 ANKHD1Q8IWZ3 2542 aaKnown RBP11.67□□□□□ -0.54
CLCN4-201ENST00000380829 HCFC1P51610 2035 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 ITGB1BP1O14713 200 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 IGKV1D-33P01593 117 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 IGKV1-33P01594 117 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 OR5G3P0C626 314 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 HNF1AP20823 631 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 CDKN1BP46527 198 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 SLC38A11Q08AI6 406 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 LINC00574Q9H8X3 128 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 SLC25A22Q9H936 323 aa11.67□□□□□ -0.54
CLCN4-201ENST00000380829 RPUSD1Q9UJJ7 312 aaKnown RBP11.67□□□□□ -0.54
CLCN4-201ENST00000380829 UBE2L5PA0A1B0GUS4 154 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 B9A039 149 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 COMPP49747 757 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-201ENST00000380829 CTSZQ9UBR2 303 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 TRAV3A0A0B4J244 114 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 TRAV34A0A0B4J273 112 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 IGHV1-69-2A0A0G2JMI3 117 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 LYNX1G3V0Z9 82 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 LYNX1P0DP58 116 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 S100A7P31151 101 aa11.66□□□□□ -0.54
CLCN4-201ENST00000380829 EFNB3Q15768 340 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms