RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RNF126Q9BV68 326 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 A0A0G2JLM5 398 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 A1L4Q6 167 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 MEIG1Q5JSS6 88 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 CELA3BP08861 270 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 C9orf106Q8NAJ2 232 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 SLC25A28Q96A46 364 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 NEUROG3Q9Y4Z2 214 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 Q6AWC8 147 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 C18orf12Q96KH6 178 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 YPEL1O60688 119 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 CEACAM1P13688 526 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 CIARTQ8N365 385 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-202ENST00000380518 FMC1Q96HJ9 113 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 YPEL2Q96QA6 119 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 DOPEY2Q9Y3R5 2298 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 IGKV1D-13A0A0B4J2D9 117 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 IGKV3-20P01619 116 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 IGKV1-13P0DP09 117 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 MIR17HGQ75NE6 70 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 TET1Q8NFU7 2136 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 H7C1H1 209 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 J3QRE1 110 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 HAX1O00165 279 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 ARPC1AQ92747 370 aa13.47□□□□□ -0.25
COL2A1-202ENST00000380518 RPP21Q9H633 154 aaKnown RBP13.47□□□□□ -0.25
COL2A1-202ENST00000380518 A0A1B0GW15 77 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 ASIPP42127 132 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 PPP1R27Q86WC6 154 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 ABHD17AQ96GS6 310 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 S4R3C0 116 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 RBBP6Q7Z6E9 1792 aaKnown RBP13.46□□□□□ -0.25
COL2A1-202ENST00000380518 PRR32B1ATL7 298 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 M0R381 172 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 LY6G6FQ5SQ64 297 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 TBL2Q9Y4P3 447 aaKnown RBP13.46□□□□□ -0.25
COL2A1-202ENST00000380518 C9JCJ5 164 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 SCGB1A1P11684 91 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 IMMP2LQ96T52 175 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 TUBA4BQ9H853 241 aa13.46□□□□□ -0.25
COL2A1-202ENST00000380518 ATP5LO75964 103 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 IGHV3-23P01764 117 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 MPZP25189 248 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 GPR183P32249 361 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 LYZL4Q96KX0 146 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 UPK2O00526 184 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 CTAG1AP78358 180 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 MRPS16Q9Y3D3 137 aaKnown RBP13.45□□□□□ -0.26
COL2A1-202ENST00000380518 APOHP02749 345 aaPredicted RBP13.45□□□□□ -0.26
COL2A1-202ENST00000380518 SAA1P0DJI8 122 aaPredicted RBP13.45□□□□□ -0.26
COL2A1-202ENST00000380518 TRAV8-6A0A0B4J262 113 aa13.45□□□□□ -0.26
COL2A1-202ENST00000380518 NUTF2P61970 127 aaKnown RBP13.45□□□□□ -0.26
COL2A1-202ENST00000380518 ANKRD36A6QL64 1941 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 GATA2P23769 480 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-202ENST00000380518 ATRAIDQ6UW56 229 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 C18orf15Q96N68 181 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 RPL23P62829 140 aaKnown RBP13.44□□□□□ -0.26
COL2A1-202ENST00000380518 TMEM170BQ5T4T1 132 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 ZNF497Q6ZNH5 498 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 A0A087WV48 116 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 SAA2-SAA4A0A096LPE2 208 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 NPFFO15130 113 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 SAA2P0DJI9 122 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-202ENST00000380518 PSMG4Q5JS54 123 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 CRIPAKQ8N1N5 446 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 PAQR4Q8N4S7 273 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-202ENST00000380518 SUMO2P61956 95 aaKnown RBP13.44□□□□□ -0.26
COL2A1-202ENST00000380518 ID3Q02535 119 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 WNT10AQ9GZT5 417 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 ZNF319Q9P2F9 582 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 OTOFQ9HC10 1997 aa13.44□□□□□ -0.26
COL2A1-202ENST00000380518 CCL3L1P16619 93 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 LEMD1Q68G75 181 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 PEF1Q9UBV8 284 aaKnown RBP13.43□□□□□ -0.26
COL2A1-202ENST00000380518 IGHV3-66A0A0C4DH42 116 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 C15orf61A6NNL5 157 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 SMIM13P0DJ93 91 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 TTC9CQ8N5M4 171 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 Q9H3A6 140 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
COL2A1-202ENST00000380518 F8VVB4 439 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 F8VWA3 439 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 H0YIZ8 118 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 ZIC4Q8N9L1 334 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 IZUMO1RA6ND01 250 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 CCL20P78556 96 aa13.43□□□□□ -0.26
COL2A1-202ENST00000380518 MORN2Q502X0 79 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 DEPPQ9NTK1 212 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 SEMA5BQ9P283 1151 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 HOXA5P20719 270 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 CD69Q07108 199 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 NEUROG1Q92886 237 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 TNFRSF18Q9Y5U5 241 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 ORMDL3Q8N138 153 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 FER1L6-AS1Q8NA97 138 aa13.42□□□□□ -0.26
COL2A1-202ENST00000380518 IGKV3OR2-268A0A0C4DH90 116 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 ZFP36L1Q07352 338 aaKnown RBP13.41□□□□□ -0.26
COL2A1-202ENST00000380518 ARID2Q68CP9 1835 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms