RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 EFNB3Q15768 340 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 ASPHD1Q5U4P2 390 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 NTN3O00634 580 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-202ENST00000379826 VMA21Q3ZAQ7 101 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 ODF3L1Q8IXM7 274 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 ZNF114Q8NC26 417 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 TRBV6-6A0A0A6YYG2 114 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 CD99P14209 185 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-202ENST00000379826 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-202ENST00000379826 K7EQM0 130 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 NDUFB3O43676 98 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 GAL3ST2Q9H3Q3 398 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 SAA2-SAA4A0A096LPE2 208 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 SAA2P0DJI9 122 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-202ENST00000379826 C1orf194Q5T5A4 169 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 GNB4Q9HAV0 340 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 NRN1Q9NPD7 142 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 ASCL3Q9NQ33 180 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 WDR83OSQ9Y284 106 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 DPRXA6NFQ7 191 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 C9orf172C9J069 976 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 DKK1O94907 266 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 DUTP33316 252 aaKnown RBP9.44□□□□□ -0.9
SMAD9-202ENST00000379826 MORN2Q502X0 79 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 COLCA1Q6ZS62 124 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 ST6GALNAC3Q8NDV1 305 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 LINC01560Q8TB33 94 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 SNHG12Q9BXW3 62 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 C15orf62A8K5M9 175 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 HLA-DQA1P01909 254 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 MT-ND6P03923 174 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 LRRC10Q5BKY1 277 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 PRNTQ86SH4 94 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 RBFOX2O43251 390 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMAD9-202ENST00000379826 PF4P02776 101 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 MAS1LP35410 378 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 FOXF2Q12947 444 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 PEAR1Q5VY43 1037 aaPredicted RBP9.44□□□□□ -0.9
SMAD9-202ENST00000379826 FA2HQ7L5A8 372 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 RNF138Q8WVD3 245 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 COQ2Q96H96 371 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 GGTLC1Q9BX51 225 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 MKI67P46013 3256 aaKnown RBP9.44□□□□□ -0.9
SMAD9-202ENST00000379826 MYO7BQ6PIF6 2116 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 ZNF146Q15072 292 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 PMCHL1Q16048 86 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 AARDQ4LEZ3 155 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 OR2T6Q8NHC8 308 aa9.44□□□□□ -0.9
SMAD9-202ENST00000379826 MOSP00540 346 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
SMAD9-202ENST00000379826 MMDQ15546 238 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 CD177Q8N6Q3 437 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 SLC25A10Q9UBX3 287 aaPredicted RBP9.43□□□□□ -0.9
SMAD9-202ENST00000379826 TRAV5A0A0B4J249 113 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 C8orf88P0DMB2 117 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 COX7A1P24310 79 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 GNG5P63218 68 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 C11orf1Q9H5F2 150 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 IDI2-AS1Q9NZ38 188 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 HIST1H1EP10412 219 aaKnown RBP9.43□□□□□ -0.9
SMAD9-202ENST00000379826 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
SMAD9-202ENST00000379826 SELLP14151 372 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 TDGF1P3P51864 188 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 FOXA3P55318 350 aaPredicted RBP9.43□□□□□ -0.9
SMAD9-202ENST00000379826 Q6ZT83 130 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 OR1L8Q8NGR8 309 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 RNASEH2CQ8TDP1 164 aaKnown RBP9.43□□□□□ -0.9
SMAD9-202ENST00000379826 RNF2Q99496 336 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 DNAJC4Q9NNZ3 241 aa9.43□□□□□ -0.9
SMAD9-202ENST00000379826 AMMECR1Q9Y4X0 333 aaPredicted RBP9.43□□□□□ -0.9
SMAD9-202ENST00000379826 TRBV9A0A0B4J1U6 114 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 LOC389332A0A1B0GUA5 103 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 PGPA6NDG6 321 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 ISLRO14498 428 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 PCP4P48539 62 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 OR8B3Q8NGG8 313 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 OR8B2Q96RD0 313 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 PARD6GQ9BYG4 376 aaPredicted RBP9.42□□□□□ -0.9
SMAD9-202ENST00000379826 BRWD1Q9NSI6 2320 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 FOXL1Q12952 345 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 COX19Q49B96 90 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 PRSS3P2Q8NHM4 247 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 A0A1W2PN81 502 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 COL8A1P27658 744 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 FAM162BQ5T6X4 162 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 MAP1LC3CQ9BXW4 147 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 IGHV2OR16-5A0A0B4J2B6 119 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 AHRRA9YTQ3 701 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 TMSB15BA0A087X1C1 80 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 C15orf61A6NNL5 157 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 K7ENP7 123 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 PYYP10082 97 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 DNLZQ5SXM8 178 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 GCSAMQ8N6F7 178 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 FAM216BQ8N7L0 139 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms