RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 APLNQ9ULZ1 77 aa13.01□□□□□ -0.33
PDLIM4-202ENST00000379018 NSG2Q9Y328 171 aa13.01□□□□□ -0.33
PDLIM4-202ENST00000379018 IGHV7-4-1A0A0J9YVY3 117 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 TEX50A0A1B0GTY4 177 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 C15orf62A8K5M9 175 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 F8W735 103 aaPredicted RBP13□□□□□ -0.33
PDLIM4-202ENST00000379018 K7EMT4 169 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 RBFOX2O43251 390 aaKnown RBP eCLIP13□□□□□ -0.33
PDLIM4-202ENST00000379018 TMBIM6P55061 237 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 ERVK-16P61578 105 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 TMEM187Q14656 261 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 LEMD1Q68G75 181 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 ZNF367Q7RTV3 350 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 BEST4Q8NFU0 473 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 OR1L8Q8NGR8 309 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 CMTM3Q96MX0 182 aa13□□□□□ -0.33
PDLIM4-202ENST00000379018 F11RQ9Y624 299 aaKnown RBP13□□□□□ -0.33
PDLIM4-202ENST00000379018 ZNF818PQ6ZRF7 136 aa12.99□□□□□ -0.33
PDLIM4-202ENST00000379018 SPARTQ8N0X7 666 aa12.99□□□□□ -0.33
PDLIM4-202ENST00000379018 LGALS14Q8TCE9 139 aa12.99□□□□□ -0.33
PDLIM4-202ENST00000379018 GIMAP1Q8WWP7 306 aa12.99□□□□□ -0.33
PDLIM4-202ENST00000379018 NDUFB11Q9NX14 153 aa12.99□□□□□ -0.33
PDLIM4-202ENST00000379018 DAPK2Q9UIK4 370 aa12.99□□□□□ -0.33
PDLIM4-202ENST00000379018 ETV7Q9Y603 341 aa12.99□□□□□ -0.33
PDLIM4-202ENST00000379018 TRDV1A0A1B0GX56 115 aa12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 K7EIM0 57 aa12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 NUPL2O15504 423 aaKnown RBP12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 CMC4P56277 68 aaPredicted RBP12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 TCTAP57738 103 aa12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 POU2AF1Q16633 256 aa12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 THOC7Q6I9Y2 204 aaKnown RBP12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 LINC00299Q6ZSB3 139 aa12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 ZBTB34Q8NCN2 500 aa12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 LSM10Q969L4 123 aaKnown RBP12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 OR51B2Q9Y5P1 312 aa12.98□□□□□ -0.33
PDLIM4-202ENST00000379018 NOTOA8MTQ0 251 aa12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 IGHV3-48P01763 117 aa12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 RELQ04864 619 aaPredicted RBP12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 TBCEQ15813 527 aaPredicted RBP12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 HSD17B13Q7Z5P4 300 aaPredicted RBP12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 RAB2BQ8WUD1 216 aa12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 MISP3Q96FF7 219 aa12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 PLEKHA2Q9HB19 425 aa12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 MUC4Q99102 2169 aa12.97□□□□□ -0.33
PDLIM4-202ENST00000379018 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 MARCH11A6NNE9 402 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 DNASE2O00115 360 aaPredicted RBP12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 SCGNO76038 276 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 RLN1P04808 185 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 EIF4EP06730 217 aaKnown RBP12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 CTSGP08311 255 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 HLA-DMBP28068 263 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 DEFB131AP59861 70 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 RPL11P62913 178 aaKnown RBP12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 MSMO1Q15800 293 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 FCGR1BQ92637 280 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 SLC25A46Q96AG3 418 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 NDUFA4L2Q9NRX3 87 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 RHBDL2Q9NX52 303 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 COMMD9Q9P000 198 aa12.96□□□□□ -0.33
PDLIM4-202ENST00000379018 AGRNO00468 2067 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 TRAV14DV4A0A0A6YYC5 116 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 MEIS3P1A6NDR6 274 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 KRASP01116 189 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 G6PCP35575 357 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 HERV-K104P61576 105 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 PAFAH1B2P68402 229 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 Q6ZTC4 211 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 LINC00336Q6ZUF6 198 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 ZNF414Q96IQ9 312 aa12.95□□□□□ -0.34
PDLIM4-202ENST00000379018 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 ST8SIA3O43173 380 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 SNAPC5O75971 98 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 LPAR6P43657 344 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 HOGA1Q86XE5 327 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 STHQ8IWL8 128 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 CENPSQ8N2Z9 138 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 FAM24BQ8N5W8 94 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 Q8NAQ8 132 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 ST8SIA2Q92186 375 aa12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 PINX1Q96BK5 328 aaKnown RBP12.94□□□□□ -0.34
PDLIM4-202ENST00000379018 C15orf61A6NNL5 157 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 H3BMQ9 156 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 M0R2N4 97 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 RBMY1A1P0DJD3 496 aaKnown RBP12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 RBMY1CP0DJD4 496 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 MFAP4P55083 255 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 RBMY1FQ15415 496 aaKnown RBP12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 UBE2UQ5VVX9 321 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 FAM90A2PQ658T7 463 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 CLVS1Q8IUQ0 354 aaPredicted RBP12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 FCAMRQ8WWV6 532 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 MS4A6AQ9H2W1 248 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms