RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 RCC1LQ96I51 464 aaKnown RBP13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 MGST2Q99735 147 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 TBL2Q9Y4P3 447 aaKnown RBP13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 CSMD2Q7Z408 3487 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 SNRNP70P08621 437 aaKnown RBP13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 OR13C7P0DN81 318 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 ADCYAP1P18509 176 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 MAS1LP35410 378 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 MMDQ15546 238 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 RPP25LQ8N5L8 163 aaKnown RBP13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 NPVFQ9HCQ7 196 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 MPDU1O75352 247 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 RPL27AP46776 148 aaKnown RBP13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 DSCR9P59020 149 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 MLANAQ16655 118 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 FFAR4Q5NUL3 377 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 CCDC28AQ8IWP9 274 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 ZNF709Q8N972 641 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 LFNGQ8NES3 379 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 NPBQ8NG41 125 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 SVEP1Q4LDE5 3571 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 TRAV1-1A0A0B4J248 108 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 FNDC10F2Z333 226 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 C17orf112F2Z3M2 114 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 NBR2O15453 112 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 ACTL6BO94805 426 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 NDUFA3O95167 84 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 PLA2G2AP14555 144 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 SAA4P35542 130 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 GNB1P62873 340 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 GUK1Q16774 197 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 MBD3L1Q8WWY6 194 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 MALSU1Q96EH3 234 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 P2RX4Q99571 388 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 GGTLC1Q9BX51 225 aa13.86□□□□□ -0.19
THUMPD2-201ENST00000378727 CENPEQ02224 2701 aa13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 CENPVL3A0A0U1RRI6 287 aa13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 REG1AP05451 166 aa13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 HES1Q14469 280 aa13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 CLEC12BQ2HXU8 276 aa13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 OR2T10Q8NGZ9 312 aa13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 PTPN13Q12923 2485 aa13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 ANKRD17O75179 2603 aaKnown RBP13.85□□□□□ -0.19
THUMPD2-201ENST00000378727 BTBD17A6NE02 478 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 TEX22C9J3V5 150 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 EIF3GO75821 320 aaKnown RBP eCLIP13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 AREGP15514 252 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 EBI3Q14213 229 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 PLGLAQ15195 96 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 Q8N6K4 173 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 TENM4Q6N022 2769 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 POLQO75417 2590 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 NPFFO15130 113 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 SCO1O75880 301 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 APOC3P02656 99 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 APELAP0DMC3 54 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 OPRK1P41145 380 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 CD69Q07108 199 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 GAMTQ14353 236 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 TEPPQ6URK8 271 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 LCN15Q6UWW0 184 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 KIAA1456Q9P272 454 aa13.84□□□□□ -0.19
THUMPD2-201ENST00000378727 HBE1P02100 147 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 MBP02144 154 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 C10orf91Q5T1B1 145 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 OR10G4Q8NGN3 311 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 OR10G9Q8NGN4 311 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 OR10G7Q8NGN6 311 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 SRSF12Q8WXF0 261 aaKnown RBP13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 RARRES2Q99969 163 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 EIF5A2Q9GZV4 153 aaKnown RBP13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 IGKV1OR2-108A0A075B7D4 117 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 YIF1AO95070 293 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 DEFA4P12838 97 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 GCSAMLQ5JQS6 135 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 MIC13Q5XKP0 118 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 PVRIGQ6DKI7 326 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 ZNF114Q8NC26 417 aa13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 FNDC4Q9H6D8 234 aaPredicted RBP13.83□□□□□ -0.2
THUMPD2-201ENST00000378727 A0A096LNT2 108 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 MAP1LC3B2A6NCE7 125 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 MSMBP08118 114 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 SFTA3P0C7M3 94 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 SLC25A16P16260 332 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 M6PRP20645 277 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 SUB1P53999 127 aaKnown RBP eCLIP13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 MFAP2P55001 183 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 C5orf64Q2M2E5 130 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 FAM120AOSQ5T036 256 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 C19orf35Q6ZS72 473 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 TMEM144Q7Z5S9 345 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 SSMEM1Q8WWF3 244 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 PBDC1Q9BVG4 233 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 MAP1LC3BQ9GZQ8 125 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 SLC25A22Q9H936 323 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 PXMP4Q9Y6I8 212 aa13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 MAP1AP78559 2803 aaPredicted RBP13.82□□□□□ -0.2
THUMPD2-201ENST00000378727 GPX4P36969 197 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms