RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 UPK2O00526 184 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 KLRB1Q12918 225 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 SAPCD1Q5SSQ6 148 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 RAMP3O60896 148 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 CD55P08174 381 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 NMUP48645 174 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 HBBP68871 147 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 C12orf54Q6X4T0 127 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 TCF24Q7RTU0 167 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 WDR83OSQ9Y284 106 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 CADP27708 2225 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 MGAMO43451 1857 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 DUTP33316 252 aaKnown RBP9.44□□□□□ -0.9
RPGR-203ENST00000378505 CCL20P78556 96 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 TM4SF20Q53R12 229 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 ABCA4P78363 2273 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 TRAV9-1A0A075B6T8 112 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 SAA2-SAA4A0A096LPE2 208 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 C15orf61A6NNL5 157 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 PEX7O00628 323 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 SAA2P0DJI9 122 aaPredicted RBP9.44□□□□□ -0.9
RPGR-203ENST00000378505 TAS2R60P59551 318 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 RNF144BQ7Z419 303 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 OR10AG1Q8NH19 301 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 NEU1Q99519 415 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 ATG101Q9BSB4 218 aa9.44□□□□□ -0.9
RPGR-203ENST00000378505 SHANK1Q9Y566 2161 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 FOXH1O75593 365 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 ANOS1P23352 680 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 DLX1P56177 255 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 SRSF4Q08170 494 aaKnown RBP9.43□□□□□ -0.9
RPGR-203ENST00000378505 MIR17HGQ75NE6 70 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 DYNLRB2Q8TF09 96 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 TTC28Q96AY4 2481 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 NOTCH3Q9UM47 2321 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 CGB1A6NKQ9 187 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 HLA-DRB1P01911 266 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 CCL3L1P16619 93 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 CSRP1P21291 193 aaKnown RBP9.43□□□□□ -0.9
RPGR-203ENST00000378505 ZNF841Q6ZN19 808 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 OR52E5Q8NH55 327 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 MAP1LC3AQ9H492 121 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 LRRK1Q38SD2 2015 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 FANCMQ8IYD8 2048 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 SAA1P0DJI8 122 aaPredicted RBP9.43□□□□□ -0.9
RPGR-203ENST00000378505 NPPCP23582 126 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 CFPP27918 469 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 EBLN2Q6P2I7 272 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 BMPERQ8N8U9 685 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 BTF3P20290 206 aaKnown RBP9.43□□□□□ -0.9
RPGR-203ENST00000378505 RELQ04864 619 aaPredicted RBP9.43□□□□□ -0.9
RPGR-203ENST00000378505 SLC25A34Q6PIV7 304 aa9.43□□□□□ -0.9
RPGR-203ENST00000378505 IGHV1-18A0A0C4DH31 117 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 IGHV3-35A0A0C4DH35 117 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 SRRM5B3KS81 715 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 GATA2P23769 480 aaPredicted RBP9.42□□□□□ -0.9
RPGR-203ENST00000378505 HINT1P49773 126 aaPredicted RBP9.42□□□□□ -0.9
RPGR-203ENST00000378505 TBR1Q16650 682 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 FAM90A9PA6NNJ1 464 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 CX3CL1P78423 397 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 C2orf83Q53S99 150 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 NMSQ5H8A3 153 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 FOXL2NBQ6ZUU3 175 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 RTN4RL2Q86UN3 420 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 GFRA3O60609 400 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 ATP5G2Q06055 141 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 REC114Q7Z4M0 266 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 NEU4Q8WWR8 484 aaPredicted RBP9.42□□□□□ -0.9
RPGR-203ENST00000378505 REG4Q9BYZ8 158 aa9.42□□□□□ -0.9
RPGR-203ENST00000378505 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.42□□□□□ -0.9
RPGR-203ENST00000378505 IL18BPO95998 194 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 PSMB2P49721 201 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 Q0VFX4 171 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 CBLN4Q9NTU7 201 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 NLRC5Q86WI3 1866 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
RPGR-203ENST00000378505 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 DPRXA6NFQ7 191 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 TFPI2P48307 235 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 B3GALT5-AS1P59052 145 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 EEF1AKMT3Q96AZ1 226 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 MYLKQ15746 1914 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 PSPNO60542 156 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 TFF1P04155 84 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 FOXF2Q12947 444 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 IMMP2LQ96T52 175 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 PIMREGQ9BSJ6 248 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 GSN-AS1Q9NRJ2 163 aa9.41□□□□□ -0.9
RPGR-203ENST00000378505 OR4C46A6NHA9 309 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 SOD3P08294 240 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 PDLIM4P50479 330 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 ATP5J2P56134 94 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 PLSCR4Q9NRQ2 329 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 C21orf62Q9NYP8 219 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 MED13LQ71F56 2210 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 TRBV6-6A0A0A6YYG2 114 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms