RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 IFI27L2Q9H2X8 130 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 OBSL1O75147 1896 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 OR5AL1P0C617 328 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 TMEM30BQ3MIR4 351 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 NMSQ5H8A3 153 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 DPF1Q92782 380 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 A0A0G2JRQ6 117 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 IL4P05112 153 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 MEF2CQ06413 473 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-203ENST00000378169 OR5R1Q8NH85 324 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 CLDND2Q8NHS1 167 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 COQ2Q96H96 371 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 PCNX3Q9H6A9 2034 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 A1L4Q6 167 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 TRGC1P0CF51 173 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 C10orf55Q5SWW7 151 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 CRIM1Q9NZV1 1036 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 PAM16Q9Y3D7 125 aa10.97□□□□□ -0.65
NPHP4-203ENST00000378169 HNRNPA3P51991 378 aaKnown RBP10.96□□□□□ -0.65
NPHP4-203ENST00000378169 NHLH1Q02575 133 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 PLA2G2CQ5R387 149 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 Q6P435 159 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 LINC00305Q7Z4B0 112 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 WDR31Q8NA23 367 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 A0A087X0M5 115 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 IGHV3-49A0A0A0MS15 119 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 A0A1B0GX30 115 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 IGKV1D-33P01593 117 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 IGKV1-33P01594 117 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 IGHV3-23P01764 117 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 APCSP02743 223 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 Q6ZRM9 215 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.96□□□□□ -0.65
NPHP4-203ENST00000378169 VN1R17PQ8TDU5 208 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 LIME1Q9H400 295 aa10.96□□□□□ -0.65
NPHP4-203ENST00000378169 IGKV1-6A0A0C4DH72 117 aa10.96□□□□□ -0.66
NPHP4-203ENST00000378169 TFPI2P48307 235 aa10.96□□□□□ -0.66
NPHP4-203ENST00000378169 LOXL3P58215 753 aa10.96□□□□□ -0.66
NPHP4-203ENST00000378169 CENPWQ5EE01 88 aa10.96□□□□□ -0.66
NPHP4-203ENST00000378169 GBGT1Q8N5D6 347 aa10.96□□□□□ -0.66
NPHP4-203ENST00000378169 PRRC2CQ9Y520 2896 aaKnown RBP10.96□□□□□ -0.66
NPHP4-203ENST00000378169 COL4A4P53420 1690 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-203ENST00000378169 A0A0G2JNJ9 132 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 SCO2A0A1W2PP80 73 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 GRIFINA4D1Z8 144 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 A8MWL6 223 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 SLC17A3O00476 420 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 MFAP4P55083 255 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 FAM53AQ6NSI3 398 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-203ENST00000378169 MIR17HGQ75NE6 70 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 Q9UFV3 132 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 MBD3L4A6NDZ8 208 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-203ENST00000378169 MBD3L3A6NE82 208 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-203ENST00000378169 WIPF3A6NGB9 483 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 MBD3L5A6NJ08 208 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-203ENST00000378169 IGKV3-15P01624 115 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 CFPP27918 469 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 CD81P60033 236 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 TBR1Q16650 682 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 MBD3L2Q8NHZ7 208 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-203ENST00000378169 VKORC1Q9BQB6 163 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 LY6HO94772 140 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 TMEM183BQ1AE95 376 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 COX19Q49B96 90 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 CYP2G1PQ6ZSU1 146 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 OR10W1Q8NGF6 305 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 CYYR1Q96J86 154 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 PRUNE2Q8WUY3 3088 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 LINC00473A8K010 186 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 C1QTNF9BB2RNN3 333 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 PRR30Q53SZ7 412 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-203ENST00000378169 MBNL2Q5VZF2 373 aaKnown RBP10.95□□□□□ -0.66
NPHP4-203ENST00000378169 ASCL4Q6XD76 172 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 HSPB7Q9UBY9 170 aa10.95□□□□□ -0.66
NPHP4-203ENST00000378169 A0A0C4DFX4 3053 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 CXorf65A6NEN9 183 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 PGPEP1LA6NFU8 196 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 ISLRO14498 428 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
NPHP4-203ENST00000378169 RPUSD1Q9UJJ7 312 aaKnown RBP10.94□□□□□ -0.66
NPHP4-203ENST00000378169 COL4A3Q01955 1670 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 ACAA1P09110 424 aaPredicted RBP10.94□□□□□ -0.66
NPHP4-203ENST00000378169 ANOS1P23352 680 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 RIGQ13278 110 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 ICAM4Q14773 271 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 TMEM177Q53S58 311 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 SFRP2Q96HF1 295 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 IGKV1D-17A0A075B6S4 117 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 TRBV23-1A0A0A0MS06 115 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 TRAV3A0A0B4J244 114 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 C15orf61A6NNL5 157 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 UPK2O00526 184 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 CBLN1P23435 193 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 CCKARP32238 428 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 DTX1Q86Y01 620 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 TMEM208Q9BTX3 173 aa10.94□□□□□ -0.66
NPHP4-203ENST00000378169 NPIPB11E5RHQ5 1161 aa10.93□□□□□ -0.66
NPHP4-203ENST00000378169 HSPB9Q9BQS6 159 aa10.93□□□□□ -0.66
NPHP4-203ENST00000378169 NBEAP1P0C6P0 100 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms