RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 PTBP1P26599 531 aaKnown RBP eCLIP8.79□□□□□ -12e-22■■■■■ 51.6
SMARCE1-203ENST00000377808 GUCA2BQ16661 112 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 CD300EQ496F6 205 aaPredicted RBP8.79□□□□□ -1
SMARCE1-203ENST00000377808 Q56UQ5 140 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 OR4C16Q8NGL9 310 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 ZNF502Q8TBZ5 544 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 CACNG8Q8WXS5 425 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 MISP3Q96FF7 219 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 PDCD10Q9BUL8 212 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 PLEKHA3Q9HB20 300 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 MCUBQ9NWR8 336 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 SIGLEC8Q9NYZ4 499 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 RSL24D1Q9UHA3 163 aaKnown RBP8.79□□□□□ -1
SMARCE1-203ENST00000377808 CEPT1Q9Y6K0 416 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 U3KQK5 164 aa8.79□□□□□ -1
SMARCE1-203ENST00000377808 IFNA17P01571 189 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 CTSDP07339 412 aaPredicted RBP8.78□□□□□ -1
SMARCE1-203ENST00000377808 TNFSF8P32971 234 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 PYDC2Q56P42 97 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 GPHB5Q86YW7 130 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 SBSPONQ8IVN8 264 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 CADM3Q8N126 398 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 SLC35G3Q8N808 338 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 OR51S1Q8NGJ8 323 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 OR1L6Q8NGR2 347 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 VN1R17PQ8TDU5 208 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 RRNAD1Q96FB5 475 aaKnown RBP8.78□□□□□ -1
SMARCE1-203ENST00000377808 TUBA4BQ9H853 241 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 C21orf62Q9NYP8 219 aa8.78□□□□□ -1
SMARCE1-203ENST00000377808 LGALS9O00182 355 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 TGOLN2O43493 480 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 IGKV1-5P01602 117 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 OR5AC1P0C628 307 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 S100A5P33763 92 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 HOXA1P49639 335 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 MFAP2P55001 183 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 CD81P60033 236 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 HSPE1P61604 102 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 ERHP84090 104 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 PRCDQ00LT1 54 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 KLK9Q2XQG4 91 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 TM4SF20Q53R12 229 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 UNQ9165/PRO28630Q6UXU0 137 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 OR2K2Q8NGT1 345 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 SCARB1Q8WTV0 552 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 PINX1Q96BK5 328 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 WWC2-AS2Q96NR7 200 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 PRRT1Q99946 306 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 NAA60Q9H7X0 242 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 ZMAT4Q9H898 229 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 PALMDQ9NP74 551 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 ENY2Q9NPA8 101 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 KLK9Q9UKQ9 250 aa8.77□□□□□ -1.01
SMARCE1-203ENST00000377808 ANKRD20A5PA0PJZ0 165 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 TMEM213A2RRL7 107 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 GSTZ1O43708 216 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 CBLN1P23435 193 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 ZNF57Q68EA5 555 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 BTNL8Q6UX41 500 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 Q8N1Y9 231 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 OR2C3Q8N628 320 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 UXS1Q8NBZ7 420 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 OR1P1Q8NH06 330 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 WDR89Q96FK6 387 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 BSCL2Q96G97 398 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 RTBDNQ9BSG5 229 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 C20orf24Q9BUV8 137 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 C5orf66Q9H5L9 145 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 SLC2A8Q9NY64 477 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 TECRQ9NZ01 308 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 SCP2D1Q9UJQ7 156 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 UFC1Q9Y3C8 167 aa8.76□□□□□ -1.01
SMARCE1-203ENST00000377808 IGHV3OR16-8A0A075B7F1 116 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 K7EIM0 57 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 ST8SIA3O43173 380 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 B3GALNT1O75752 331 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 SCAF4O95104 1147 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 MT-CO2P00403 227 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 IGHV3-48P01763 117 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 UCP1P25874 307 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 SNCAP37840 140 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 SURF2Q15527 256 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 RCHY1Q96PM5 261 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 NEURL2Q9BR09 285 aa8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 THAP7Q9BT49 309 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 NXF2Q9GZY0 626 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-203ENST00000377808 A0A0B4J293 547 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 A0A0G2JRQ6 117 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 CRYM-AS1A6NIL9 109 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 A8MWP6 167 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 ZNF207O43670 478 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 YIF1AO95070 293 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 FAUP35544 74 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 ETV6P41212 452 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 DHODHQ02127 395 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 TMEM268Q5VZI3 342 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms