RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TMPRSS2O15393 492 aa11.46□□□□□ -0.58
MSH5-202ENST00000375740 KIR2DS2P43631 304 aa11.46□□□□□ -0.58
MSH5-202ENST00000375740 COMPP49747 757 aaPredicted RBP11.46□□□□□ -0.58
MSH5-202ENST00000375740 RELBQ01201 579 aa11.46□□□□□ -0.58
MSH5-202ENST00000375740 ZNF439Q8NDP4 499 aa11.46□□□□□ -0.58
MSH5-202ENST00000375740 CORO2AQ92828 525 aa11.46□□□□□ -0.58
MSH5-202ENST00000375740 HSPB9Q9BQS6 159 aa11.46□□□□□ -0.58
MSH5-202ENST00000375740 PATZ1Q9HBE1 687 aaKnown RBP11.46□□□□□ -0.58
MSH5-202ENST00000375740 TMEM140Q9NV12 185 aa11.46□□□□□ -0.58
MSH5-202ENST00000375740 YLPM1P49750 1951 aaKnown RBP11.46□□□□□ -0.58
MSH5-202ENST00000375740 PAGE4O60829 102 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 C1QTNF9P0C862 333 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 SRP14P37108 136 aaKnown RBP11.45□□□□□ -0.58
MSH5-202ENST00000375740 VWC2Q2TAL6 325 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 ZNF114Q8NC26 417 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 RND1Q92730 232 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 DERL1Q9BUN8 251 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 PCNX1Q96RV3 2341 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 BSNQ9UPA5 3926 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 PSMB3P49720 205 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.45□□□□□ -0.58
MSH5-202ENST00000375740 OR4S2Q8NH73 311 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 LINC00574Q9H8X3 128 aa11.45□□□□□ -0.58
MSH5-202ENST00000375740 TMEM250H0YL14 139 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 TMEM144Q7Z5S9 345 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 OR52E5Q8NH55 327 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 TET2Q6N021 2002 aaPredicted RBP11.44□□□□□ -0.58
MSH5-202ENST00000375740 DCHS1Q96JQ0 3298 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 VDAC2P45880 294 aaPredicted RBP11.44□□□□□ -0.58
MSH5-202ENST00000375740 THBS3P49746 956 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 RBPJQ06330 500 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 FFAR4Q5NUL3 377 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 COL5A1-AS1Q5SY13 56 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 VAMP8Q9BV40 100 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 NPCDR1Q9BY65 106 aa11.44□□□□□ -0.58
MSH5-202ENST00000375740 HEYLQ9NQ87 328 aaPredicted RBP11.44□□□□□ -0.58
MSH5-202ENST00000375740 TRAV38-1A0A0B4J264 116 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 hADV38S2A0JD32 116 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 NKX6-3A6NJ46 265 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 SERF1AO75920 110 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 COTL1Q14019 142 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 ETFRF1Q6IPR1 90 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 KCNIP4Q6PIL6 250 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 OR10G9Q8NGN4 311 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 SLC35E1Q96K37 410 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 SAP30LQ9HAJ7 183 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 SLC25A10Q9UBX3 287 aaPredicted RBP11.43□□□□□ -0.58
MSH5-202ENST00000375740 RPUSD1Q9UJJ7 312 aaKnown RBP11.43□□□□□ -0.58
MSH5-202ENST00000375740 RRHO14718 337 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 LCN2P80188 198 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 SSX8Q7RTT4 187 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 MRPL52Q86TS9 123 aaKnown RBP11.43□□□□□ -0.58
MSH5-202ENST00000375740 LINC01551Q86U37 167 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 ZNF709Q8N972 641 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 CCL17Q92583 94 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 NEUROG1Q92886 237 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 ZNRD1Q9P1U0 126 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 MSRB2Q9Y3D2 182 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 PPIAL4EA0A075B759 164 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 VSTM5A8MXK1 200 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 PPIAL4DF5H284 164 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 TMEM178BH3BS89 294 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 PPIAL4FP0DN26 164 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 TMEM183BQ1AE95 376 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 PDLIM3Q53GG5 364 aaPredicted RBP11.43□□□□□ -0.58
MSH5-202ENST00000375740 ABHD12Q8N2K0 398 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 OR1L6Q8NGR2 347 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 SGMS2Q8NHU3 365 aa11.43□□□□□ -0.58
MSH5-202ENST00000375740 SHISA9B4DS77 424 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 E7EQL1 145 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 FCN3O75636 299 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 HNF1AP20823 631 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 CBLN1P23435 193 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 CD1BP29016 333 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 OR4A47Q6IF82 309 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 SLC25A48Q6ZT89 311 aaKnown RBP11.42□□□□□ -0.58
MSH5-202ENST00000375740 ADTRPQ96IZ2 230 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 TCF19Q9Y242 345 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 LINC00312Q9Y6C7 94 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 TRGV8A0A0C4DH27 118 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 GFRA3O60609 400 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 PTTG1IPP53801 180 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 SAPCD1Q5SSQ6 148 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 C22orf15Q8WYQ4 148 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 RNASE6Q93091 150 aaKnown RBP11.42□□□□□ -0.58
MSH5-202ENST00000375740 VKORC1Q9BQB6 163 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 FAM103A1Q9BTL3 118 aaKnown RBP11.42□□□□□ -0.58
MSH5-202ENST00000375740 NGBQ9NPG2 151 aa11.42□□□□□ -0.58
MSH5-202ENST00000375740 CTXND1A0A1B0GTU2 59 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 C20orf202A1L168 122 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 UBE2G2P60604 165 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 GNB1P62873 340 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 RPL31P62899 125 aaKnown RBP11.41□□□□□ -0.58
MSH5-202ENST00000375740 WDR83OSQ9Y284 106 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 C15orf61A6NNL5 157 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 C17orf112F2Z3M2 114 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 CT45A6P0DMU7 189 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 CT45A5P0DMU8 189 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms