RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 GNG4P50150 75 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 INO80CQ6PI98 192 aaPredicted RBP11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 TBL2Q9Y4P3 447 aaKnown RBP11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 ICE1Q9Y2F5 2266 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 CADP27708 2225 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 RP1L1Q8IWN7 2480 aaPredicted RBP11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 TRAV9-1A0A075B6T8 112 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 LOXL3P58215 753 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 SLC24A4Q8NFF2 622 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 LINC00869P0C866 280 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 PMCHP20382 165 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 SPRNQ5BIV9 151 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 TRIB1Q96RU8 372 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 SFXN3Q9BWM7 321 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 GNB1LQ9BYB4 327 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 NRN1Q9NPD7 142 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 CECR9P0C854 216 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 PRR20EP86478 221 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 PRR20CP86479 221 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 PRR20DP86480 221 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 PRR20BP86481 221 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 PRR20AP86496 221 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 ALKBH2Q6NS38 261 aa11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 MRPL54Q6P161 138 aaKnown RBP11.58□□□□□ -0.56
CLCNKA-202ENST00000375692 C15orf61A6NNL5 157 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 MT-CO2P00403 227 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 OR10J4P0C629 311 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 AMTP48728 403 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 MMDQ15546 238 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 MLANAQ16655 118 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 OR4A47Q6IF82 309 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 VWA1Q6PCB0 445 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 JPT1Q9UK76 154 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 A0A1W2PS18 150 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 IGKV3-15P01624 115 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 RAB31Q13636 194 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 Q6ZT83 130 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 DDB2Q92466 427 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 ZNF503Q96F45 646 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 GCM1Q9NP62 436 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 ZNF586Q9NXT0 402 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
CLCNKA-202ENST00000375692 TRAV17A0A0B4J275 112 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 ZNF253O75346 499 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 CA1P00915 261 aaPredicted RBP11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 ZNF83P51522 516 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 CX3CL1P78423 397 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 TRAT1Q6PIZ9 186 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 FAM214BQ7L5A3 538 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 FAM19A2Q8N3H0 131 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 RBM14Q96PK6 669 aaKnown RBP11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 NABP2Q9BQ15 211 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 LY96Q9Y6Y9 160 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 AREGP15514 252 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 SPATA45Q537H7 98 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 CT45A1Q5HYN5 189 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 FAM201AQ5SY85 155 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 ZADH2Q8N4Q0 377 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 NHLRC2Q8NBF2 726 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 CT45A3Q8NHU0 189 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 SERTAD4Q9NUC0 356 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 RAXQ9Y2V3 346 aa11.56□□□□□ -0.56
CLCNKA-202ENST00000375692 TRGV8A0A0C4DH27 118 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 GGTLC3B5MD39 225 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 OR7C2O60412 319 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 MGST1P10620 155 aaKnown RBP11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 SRIP30626 198 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 HOXC12P31275 282 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 SUMO1P63165 101 aaKnown RBP11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 GAGE1Q13065 139 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 OR4S2Q8NH73 311 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 ABHD17AQ96GS6 310 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 WNT10AQ9GZT5 417 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 IL19Q9UHD0 177 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 TLN1Q9Y490 2541 aaKnown RBP11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 TPRP12270 2363 aaKnown RBP11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 SAA2P0DJI9 122 aaPredicted RBP11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 MSMPQ1L6U9 139 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 MRPL52Q86TS9 123 aaKnown RBP11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 C1orf174Q8IYL3 243 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 RNF2Q99496 336 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 TMEM14BQ9NUH8 114 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 IDI2-AS1Q9NZ38 188 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 SLC45A2Q9UMX9 530 aa11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 SMG1Q96Q15 3661 aaKnown RBP11.55□□□□□ -0.56
CLCNKA-202ENST00000375692 TRBV9A0A0B4J1U6 114 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 BMPR1BO00238 502 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 MGST3O14880 152 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 CTRLP40313 264 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 TIGITQ495A1 244 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 ATOH7Q8N100 152 aa11.54□□□□□ -0.56
CLCNKA-202ENST00000375692 RBMXL3Q8N7X1 1067 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms