RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CD3EP07766 207 aa14.07□□□□□ -0.16
VARS-215ENST00000375663 TCTAP57738 103 aa14.07□□□□□ -0.16
VARS-215ENST00000375663 SLC25A34Q6PIV7 304 aa14.07□□□□□ -0.16
VARS-215ENST00000375663 OR8B3Q8NGG8 313 aa14.07□□□□□ -0.16
VARS-215ENST00000375663 MIEN1Q9BRT3 115 aa14.07□□□□□ -0.16
VARS-215ENST00000375663 TEX38Q6PEX7 206 aa14.07□□□□□ -0.16
VARS-215ENST00000375663 LURAP1LQ8IV03 231 aa14.07□□□□□ -0.16
VARS-215ENST00000375663 SNRNP40Q96DI7 357 aaKnown RBP14.07□□□□□ -0.16
VARS-215ENST00000375663 TMEM97Q5BJF2 176 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 DMRTA1Q5VZB9 504 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 Q6ZS49 121 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 IFI27L2Q9H2X8 130 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 CDC42EP3Q9UKI2 254 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 K7ERU9 68 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 OR4A8P0C604 315 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 ZFP36L1Q07352 338 aaKnown RBP14.06□□□□□ -0.16
VARS-215ENST00000375663 RNASE7Q9H1E1 156 aaKnown RBP14.06□□□□□ -0.16
VARS-215ENST00000375663 RPL30P62888 115 aaKnown RBP14.06□□□□□ -0.16
VARS-215ENST00000375663 LINC01551Q86U37 167 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 NRN1Q9NPD7 142 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 PSPNO60542 156 aa14.06□□□□□ -0.16
VARS-215ENST00000375663 FAM90A27PA6NNH2 459 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 OR9G9P0C7N8 305 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 EAF1Q96JC9 268 aaPredicted RBP14.05□□□□□ -0.16
VARS-215ENST00000375663 HS3ST6Q96QI5 342 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 UFC1Q9Y3C8 167 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 IGHV2-5P01817 119 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 RAB1CQ92928 201 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 DUTP33316 252 aaKnown RBP14.05□□□□□ -0.16
VARS-215ENST00000375663 GLRXP35754 106 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 PCP4P48539 62 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 WDR82Q6UXN9 313 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 TMEM144Q7Z5S9 345 aa14.05□□□□□ -0.16
VARS-215ENST00000375663 ZNF124Q15973 351 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 C20orf204Q6ZNR8 217 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 LILRA1O75019 489 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 MOSP00540 346 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 BTF3P20290 206 aaKnown RBP14.04□□□□□ -0.16
VARS-215ENST00000375663 C1orf185Q5T7R7 199 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 TMEM116Q8NCL8 245 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 NEU1Q99519 415 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 DERL1Q9BUN8 251 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 ALPK3Q96L96 1907 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 SRSF12Q8WXF0 261 aaKnown RBP14.04□□□□□ -0.16
VARS-215ENST00000375663 PARD6GQ9BYG4 376 aaPredicted RBP14.04□□□□□ -0.16
VARS-215ENST00000375663 IGKV1-6A0A0C4DH72 117 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 GFRA1P56159 465 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 EFNB3Q15768 340 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 MORN2Q502X0 79 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 LINC00305Q7Z4B0 112 aa14.04□□□□□ -0.16
VARS-215ENST00000375663 IGHV2OR16-5A0A0B4J2B6 119 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 KBTBD11-OT1A0A1B0GTJ5 212 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 HBBP68871 147 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 FOXF2Q12947 444 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 RSPO1Q2MKA7 263 aaPredicted RBP14.03□□□□□ -0.16
VARS-215ENST00000375663 KHDC1LQ5JSQ8 128 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 LEMD1Q68G75 181 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 FDCSPQ8NFU4 85 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 TMEM70Q9BUB7 260 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 ZFP30Q9Y2G7 519 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 YPEL1O60688 119 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 NMUP48645 174 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 TBR1Q16650 682 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 PEAR1Q5VY43 1037 aaPredicted RBP14.03□□□□□ -0.16
VARS-215ENST00000375663 PET117Q6UWS5 81 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 TREML4Q6UXN2 200 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 TMEM256Q8N2U0 113 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 YPEL2Q96QA6 119 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 DIRC2Q96SL1 478 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 TRBV6-6A0A0A6YYG2 114 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 TIMP3P35625 211 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 TMEM30BQ3MIR4 351 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 FAM216BQ8N7L0 139 aa14.03□□□□□ -0.16
VARS-215ENST00000375663 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.03□□□□□ -0.16
VARS-215ENST00000375663 OSR1Q8TAX0 266 aaPredicted RBP14.03□□□□□ -0.16
VARS-215ENST00000375663 HLA-DRB1P01911 266 aa14.02□□□□□ -0.16
VARS-215ENST00000375663 NBEAP1P0C6P0 100 aa14.02□□□□□ -0.16
VARS-215ENST00000375663 B3GALT5-AS1P59052 145 aa14.02□□□□□ -0.16
VARS-215ENST00000375663 HOXA4Q00056 320 aaPredicted RBP14.02□□□□□ -0.16
VARS-215ENST00000375663 TMUB1Q9BVT8 246 aa14.02□□□□□ -0.16
VARS-215ENST00000375663 GGTLC1Q9BX51 225 aa14.02□□□□□ -0.16
VARS-215ENST00000375663 PEX7O00628 323 aa14.02□□□□□ -0.16
VARS-215ENST00000375663 SMIM17P0DL12 118 aa14.02□□□□□ -0.16
VARS-215ENST00000375663 UQCRFS1P47985 274 aa14.02□□□□□ -0.16
VARS-215ENST00000375663 STAG3L2P0CL84 134 aa14.02□□□□□ -0.17
VARS-215ENST00000375663 STAG3L3P0CL85 134 aa14.02□□□□□ -0.17
VARS-215ENST00000375663 FOXL1Q12952 345 aa14.02□□□□□ -0.17
VARS-215ENST00000375663 KCNS1Q96KK3 526 aa14.02□□□□□ -0.17
VARS-215ENST00000375663 AGMATQ9BSE5 352 aa14.02□□□□□ -0.17
VARS-215ENST00000375663 NTN3O00634 580 aaPredicted RBP14.01□□□□□ -0.17
VARS-215ENST00000375663 RBFOX2O43251 390 aaKnown RBP eCLIP14.01□□□□□ -0.17
VARS-215ENST00000375663 IGHV2-70P01814 119 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 GZMBP10144 247 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 GOLT1AQ6ZVE7 132 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 PRDM13Q9H4Q3 707 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 C15orf61A6NNL5 157 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 ZNF664Q8N3J9 261 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 GRAMD2BQ96HH9 432 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 TMEM189A5PLL7 270 aa14.01□□□□□ -0.17
VARS-215ENST00000375663 OR2T8A6NH00 312 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms