RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 A0A0G2JLM5 398 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 FAM223BA6NKX1 122 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 SNRPGP15A8MWD9 76 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 IFNA21P01568 189 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 PRH1P02810 166 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 HIST1H1BP16401 226 aaKnown RBP11.66□□□□□ -0.54
HSPG2-201ENST00000374673 ERHP84090 104 aaKnown RBP11.66□□□□□ -0.54
HSPG2-201ENST00000374673 SPINK9Q5DT21 86 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 C19orf35Q6ZS72 473 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 C18orf65Q6ZTR6 163 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 FAM223AQ8IWN6 122 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 KLHL30-AS1Q8NEE0 82 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 OR1S1Q8NH92 325 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 C4orf3Q8WVX3 66 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 USMG5Q96IX5 58 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 GNB4Q9HAV0 340 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 HSPB7Q9UBY9 170 aa11.66□□□□□ -0.54
HSPG2-201ENST00000374673 F11RQ9Y624 299 aaKnown RBP11.66□□□□□ -0.54
HSPG2-201ENST00000374673 ANK2Q01484 3957 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 MPTX1A8MV57 137 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 NUDT19A8MXV4 375 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 FAM90A26D6RGX4 464 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 CYB5BO43169 146 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 DEFA4P12838 97 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.54
HSPG2-201ENST00000374673 RHOGP84095 191 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 RUNX1Q01196 453 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 TNFRSF9Q07011 255 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 RGS21Q2M5E4 152 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 NECAP1Q8NC96 275 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 OR4F17Q8NGA8 305 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 OR4F4Q96R69 305 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 ENY2Q9NPA8 101 aa11.65□□□□□ -0.54
HSPG2-201ENST00000374673 C13orf42A0A1B0GVH6 325 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 I3L521 148 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 OR2J3O76001 311 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 NXPH3O95157 252 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 TSPAN15O95858 294 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 LGALS1P09382 135 aaKnown RBP11.64□□□□□ -0.55
HSPG2-201ENST00000374673 DEFA5Q01523 94 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 C8orf86Q6ZUL3 223 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 OR1P1Q8NH06 330 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 P2RX4Q99571 388 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 THYN1Q9P016 225 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 DMRT1Q9Y5R6 373 aa11.64□□□□□ -0.55
HSPG2-201ENST00000374673 CEBPZOSA8MTT3 80 aa11.63□□□□□ -0.55
HSPG2-201ENST00000374673 IGHV3-11P01762 117 aa11.63□□□□□ -0.55
HSPG2-201ENST00000374673 MFAP2P55001 183 aa11.63□□□□□ -0.55
HSPG2-201ENST00000374673 BSXQ3C1V8 233 aa11.63□□□□□ -0.55
HSPG2-201ENST00000374673 UXS1Q8NBZ7 420 aa11.63□□□□□ -0.55
HSPG2-201ENST00000374673 OR4D5Q8NGN0 318 aa11.63□□□□□ -0.55
HSPG2-201ENST00000374673 OR10C1Q96KK4 312 aa11.63□□□□□ -0.55
HSPG2-201ENST00000374673 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
HSPG2-201ENST00000374673 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 CCSO14618 274 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 NDUFB8O95169 186 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 RNASE2P10153 161 aaKnown RBP11.62□□□□□ -0.55
HSPG2-201ENST00000374673 SNCAP37840 140 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 ID3Q02535 119 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 ATP5G2Q06055 141 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 OXA1LQ15070 435 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 TATDN3Q17R31 274 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 IAH1Q2TAA2 248 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-201ENST00000374673 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 PRR31Q5SQ13 230 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 PVRIGQ6DKI7 326 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 SLC25A24Q6NUK1 477 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 ZNF343Q6P1L6 599 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 ETV3LQ6ZN32 361 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 DTD1Q8TEA8 209 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 OR5B12Q96R08 314 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 HIPK2Q9H2X6 1198 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 RBKSQ9H477 322 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 DNHD1Q96M86 4753 aa11.62□□□□□ -0.55
HSPG2-201ENST00000374673 MED6O75586 246 aa11.61□□□□□ -0.55
HSPG2-201ENST00000374673 MYCNOSP40205 109 aa11.61□□□□□ -0.55
HSPG2-201ENST00000374673 HTR2BP41595 481 aa11.61□□□□□ -0.55
HSPG2-201ENST00000374673 SUB1P53999 127 aaKnown RBP eCLIP11.61□□□□□ -0.55
HSPG2-201ENST00000374673 EXOSC2Q13868 293 aaKnown RBP11.61□□□□□ -0.55
HSPG2-201ENST00000374673 DEFB136Q30KP8 78 aa11.61□□□□□ -0.55
HSPG2-201ENST00000374673 FAM209BQ5JX69 171 aa11.61□□□□□ -0.55
HSPG2-201ENST00000374673 ZBTB8BQ8NAP8 495 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-201ENST00000374673 RAX2Q96IS3 184 aa11.61□□□□□ -0.55
HSPG2-201ENST00000374673 CXorf58Q96LI9 332 aa11.61□□□□□ -0.55
HSPG2-201ENST00000374673 HEYLQ9NQ87 328 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-201ENST00000374673 CCL24O00175 119 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 CORTO00230 105 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 SYNGR2O43760 224 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 PF4P02776 101 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 NKX2-1P43699 371 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-201ENST00000374673 FHL3Q13643 280 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 C2orf83Q53S99 150 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 GSG1LQ6UXU4 331 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 SLC24A4Q8NFF2 622 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 OR11H1Q8NG94 326 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 VN1R17PQ8TDU5 208 aa11.6□□□□□ -0.55
HSPG2-201ENST00000374673 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.59□□□□□ -0.55
HSPG2-201ENST00000374673 C5orf51A6NDU8 294 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 MFSD2BA6NFX1 497 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms