RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SMCO3A2RU48 225 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 TMEM250H0YL14 139 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 OR13C7P0DN81 318 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 HOXB4P17483 251 aaPredicted RBP10.07□□□□□ -0.8
PRPF4-202ENST00000374199 PSMB3P49720 205 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 CYB561D1Q8N8Q1 229 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 OR10W1Q8NGF6 305 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 ELLP55199 621 aaPredicted RBP10.06□□□□□ -0.8
PRPF4-202ENST00000374199 AWAT1Q58HT5 328 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 MINOS1Q5TGZ0 78 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 MINOS1-NBL1R4GNA1 71 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 IGKV1D-37A0A075B6S9 117 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 IGHV2-70DA0A0C4DH43 119 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 VENTXO95231 258 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 SSX2Q16385 188 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 MMD2Q8IY49 270 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 C15orf54Q8N8G6 183 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 C19orf24Q9BVV8 132 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 ENY2Q9NPA8 101 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 TMEM242Q9NWH2 141 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 PXMP4Q9Y6I8 212 aa10.06□□□□□ -0.8
PRPF4-202ENST00000374199 CYB5BO43169 146 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 CBLN2Q8IUK8 224 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 TXNDC17Q9BRA2 123 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 DMRT1Q9Y5R6 373 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 C7orf77A4D0Y5 90 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 GPR6P46095 362 aaPredicted RBP10.05□□□□□ -0.8
PRPF4-202ENST00000374199 CDC34P49427 236 aaPredicted RBP10.05□□□□□ -0.8
PRPF4-202ENST00000374199 MFAP2P55001 183 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 DLX1P56177 255 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 RPS16P62249 146 aaKnown RBP10.05□□□□□ -0.8
PRPF4-202ENST00000374199 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
PRPF4-202ENST00000374199 SOHLH1Q5JUK2 328 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 STPG3Q8N7X2 389 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 ZNF709Q8N972 641 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 MALSU1Q96EH3 234 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 COMMD5Q9GZQ3 224 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 SLC39A9Q9NUM3 307 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 DPM3Q9P2X0 92 aa10.05□□□□□ -0.8
PRPF4-202ENST00000374199 B4DEV8 164 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 H3BQ15 152 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 ENSAO43768 121 aaKnown RBP10.04□□□□□ -0.8
PRPF4-202ENST00000374199 OR5G3P0C626 314 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 RNF224P0DH78 156 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 CDKN1AP38936 164 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
PRPF4-202ENST00000374199 FNDC4Q9H6D8 234 aaPredicted RBP10.04□□□□□ -0.8
PRPF4-202ENST00000374199 GNG13Q9P2W3 67 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 INSIG2Q9Y5U4 225 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 SLC25A17O43808 307 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 NDUFS7O75251 213 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 IFNA1P01562 189 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 IGHV4-39P01824 125 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 CNTFRP26992 372 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 FGF8P55075 233 aaPredicted RBP10.04□□□□□ -0.8
PRPF4-202ENST00000374199 GCSAMLQ5JQS6 135 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 SLC25A22Q9H936 323 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 TBL2Q9Y4P3 447 aaKnown RBP10.04□□□□□ -0.8
PRPF4-202ENST00000374199 USP24Q9UPU5 2620 aa10.04□□□□□ -0.8
PRPF4-202ENST00000374199 PKDREJQ9NTG1 2253 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 HTR1DP28221 377 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 ERHP84090 104 aaKnown RBP10.03□□□□□ -0.8
PRPF4-202ENST00000374199 PNRC1Q12796 327 aaPredicted RBP10.03□□□□□ -0.8
PRPF4-202ENST00000374199 PPP1R27Q86WC6 154 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 RXFP4Q8TDU9 374 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 SAV1Q9H4B6 383 aaPredicted RBP10.03□□□□□ -0.8
PRPF4-202ENST00000374199 UBTD1Q9HAC8 227 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 CXorf65A6NEN9 183 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 IFNA4P05014 189 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 FBP1P09467 338 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 AREGP15514 252 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 RNF212Q495C1 297 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 FBLN7Q53RD9 439 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 MIC13Q5XKP0 118 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 SLC16A13Q7RTY0 426 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 TMEM116Q8NCL8 245 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 OR1P1Q8NH06 330 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 ONECUT1Q9UBC0 465 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 VMO1Q7Z5L0 202 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 SDF2L1Q9HCN8 221 aa10.03□□□□□ -0.8
PRPF4-202ENST00000374199 MALRD1Q5VYJ5 2156 aa10.02□□□□□ -0.8
PRPF4-202ENST00000374199 TBX15Q96SF7 602 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 TIMM23O14925 209 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 CXorf1O96002 111 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 CEACAM3P40198 252 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 B2MP61769 119 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 C10orf55Q5SWW7 151 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 RPEQ96AT9 228 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 ZNF503Q96F45 646 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.81
PRPF4-202ENST00000374199 TMPRSS5Q9H3S3 457 aa10.02□□□□□ -0.81
PRPF4-202ENST00000374199 NDUFS8O00217 210 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 RND2P52198 227 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 PLP1P60201 277 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 SRSF1Q07955 248 aaKnown RBP eCLIP10.01□□□□□ -0.81
PRPF4-202ENST00000374199 TMEM88Q6PEY1 159 aa10.01□□□□□ -0.81
PRPF4-202ENST00000374199 MOB3BQ86TA1 216 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms