RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 PXDC1Q5TGL8 231 aa11.95□□□□□ -0.5
YIPF3-202ENST00000372422 MRPL41Q8IXM3 137 aaKnown RBP11.95□□□□□ -0.5
YIPF3-202ENST00000372422 COMMD1Q8N668 190 aa11.95□□□□□ -0.5
YIPF3-202ENST00000372422 C5orf56Q8N8D9 126 aa11.95□□□□□ -0.5
YIPF3-202ENST00000372422 ENY2Q9NPA8 101 aa11.95□□□□□ -0.5
YIPF3-202ENST00000372422 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
YIPF3-202ENST00000372422 SYNGR2O43760 224 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 HLA-DRB1P01911 266 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 COMPP49747 757 aaPredicted RBP11.94□□□□□ -0.5
YIPF3-202ENST00000372422 ZNF266Q14584 549 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 PDLIM3Q53GG5 364 aaPredicted RBP11.94□□□□□ -0.5
YIPF3-202ENST00000372422 C10orf91Q5T1B1 145 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 ZNF562Q6V9R5 426 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 CIB3Q96Q77 187 aaPredicted RBP11.94□□□□□ -0.5
YIPF3-202ENST00000372422 C11orf1Q9H5F2 150 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 PLEKHA3Q9HB20 300 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 TNFRSF19Q9NS68 423 aa11.94□□□□□ -0.5
YIPF3-202ENST00000372422 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
YIPF3-202ENST00000372422 TEX50A0A1B0GTY4 177 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 A0A1W2PN81 502 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 SSSCA1O60232 199 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 OPN1MWP04001 364 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 OPN1MW2P0DN77 364 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 OPN1MW3P0DN78 364 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 CHRNA7P36544 502 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 RPL27AP46776 148 aaKnown RBP11.93□□□□□ -0.5
YIPF3-202ENST00000372422 HOXA1P49639 335 aaPredicted RBP11.93□□□□□ -0.5
YIPF3-202ENST00000372422 POLR2GP62487 172 aaKnown RBP eCLIP11.93□□□□□ -0.5
YIPF3-202ENST00000372422 VAMP2P63027 116 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 PRCDQ00LT1 54 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 DEFA5Q01523 94 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 BAXQ07812 192 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.93□□□□□ -0.5
YIPF3-202ENST00000372422 LYPD6BQ8NI32 183 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 JMJD8Q96S16 334 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 HINT2Q9BX68 163 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 SEC11CQ9BY50 192 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 NKX6-2Q9C056 277 aaPredicted RBP11.93□□□□□ -0.5
YIPF3-202ENST00000372422 MAGT1Q9H0U3 335 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 HIPK2Q9H2X6 1198 aa11.93□□□□□ -0.5
YIPF3-202ENST00000372422 LYRM2Q9NU23 88 aaPredicted RBP11.93□□□□□ -0.5
YIPF3-202ENST00000372422 STRAPQ9Y3F4 350 aaKnown RBP11.93□□□□□ -0.5
YIPF3-202ENST00000372422 SETXQ7Z333 2677 aaKnown RBP11.93□□□□□ -0.5
YIPF3-202ENST00000372422 FCN1O00602 326 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 SPP1P10451 314 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 EWSR1Q01844 656 aaKnown RBP eCLIP11.92□□□□□ -0.5
YIPF3-202ENST00000372422 FXYD3Q14802 87 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 MRGPRG-AS1Q2M3A8 158 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 BTNL8Q6UX41 500 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 DTD1Q8TEA8 209 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 SRSF12Q8WXF0 261 aaKnown RBP11.92□□□□□ -0.5
YIPF3-202ENST00000372422 SMIM3Q9BZL3 60 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 HRH4Q9H3N8 390 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 RBKSQ9H477 322 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 CELSR1Q9NYQ6 3014 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 CHST1O43916 411 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 FBXO24O75426 580 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 CX3CL1P78423 397 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 ABHD5Q8WTS1 349 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 ARPC1AQ92747 370 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 SRSF8Q9BRL6 282 aaKnown RBP11.92□□□□□ -0.5
YIPF3-202ENST00000372422 TREM1Q9NP99 234 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 NDUFA4L2Q9NRX3 87 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 UQCC1Q9NVA1 299 aa11.92□□□□□ -0.5
YIPF3-202ENST00000372422 F8W036 122 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 CLDN34H7C241 214 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 TRIM77I1YAP6 450 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 CRLF1O75462 422 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 MYOD1P15172 320 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 TAS2R30P59541 319 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 RPL23AP62750 156 aaKnown RBP11.91□□□□□ -0.5
YIPF3-202ENST00000372422 RPP30P78346 268 aaKnown RBP11.91□□□□□ -0.5
YIPF3-202ENST00000372422 ERHP84090 104 aaKnown RBP11.91□□□□□ -0.5
YIPF3-202ENST00000372422 SPINK9Q5DT21 86 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 C10orf55Q5SWW7 151 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 Q6ZRG5 221 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 NPFFR1Q9GZQ6 430 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 HEYLQ9NQ87 328 aaPredicted RBP11.91□□□□□ -0.5
YIPF3-202ENST00000372422 WSB1Q9Y6I7 421 aa11.91□□□□□ -0.5
YIPF3-202ENST00000372422 SONP18583 2426 aaKnown RBP11.9□□□□□ -0.5
YIPF3-202ENST00000372422 IGHV7-81A0A0B4J1V7 117 aa11.9□□□□□ -0.5
YIPF3-202ENST00000372422 LOC105371267A0A1B0GV96 52 aa11.9□□□□□ -0.5
YIPF3-202ENST00000372422 DNAJC9-AS1A6NH13 148 aa11.9□□□□□ -0.5
YIPF3-202ENST00000372422 SNAPINO95295 136 aa11.9□□□□□ -0.5
YIPF3-202ENST00000372422 IAPPP10997 89 aa11.9□□□□□ -0.5
YIPF3-202ENST00000372422 C9orf152Q5JTZ5 239 aa11.9□□□□□ -0.5
YIPF3-202ENST00000372422 UMAD1C9J7I0 102 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 INS-IGF2F8WCM5 200 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 TSPAN4O14817 238 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 AMY1AP04745 511 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 HILS1P60008 231 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 LFNGQ8NES3 379 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 DUX5Q96PT3 197 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 WFDC1Q9HC57 220 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 PSENENQ9NZ42 101 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 HIVEP1P15822 2718 aa11.89□□□□□ -0.51
YIPF3-202ENST00000372422 TSPAN15O95858 294 aa11.88□□□□□ -0.51
YIPF3-202ENST00000372422 CD5P06127 495 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms